| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3383 |
|---|
| Symbol | |
|---|
| ID | 8254502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4021143 |
|---|
| End bp | 4022270 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644937035 |
|---|
| Product | FecR protein |
|---|
| Protein accession | YP_003093639 |
|---|
| Protein GI | 255533267 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA AAAAGGCACA GACACTGTTA AGAAAATACC TGGCCGGTGA TTGTACAGAA
GCCGAAAAAG CATTGCTGGA ATCCTGGTAC CTGCAACGGG AGCTAAATGA TTTTCCTGAT
CTGGGTACAA AAGAGCGCCT GCAGGATAAG CAGCAACTTT TTGCTATGCT CGAAAAAACG
CATCATCCTA AAAAGCATAA CCTGTACTGG CTTAAACTGA CCGCTGCCGC TGCCCTTGCT
GCTGTTATTT TCGGTTTGTG GTTCTATACC TCACAGCAAA CAACCATAAA TTCCAATGCC
CGGGCCGTAA ATAAAAATGA TATTGCCCCA GGTGGCAACA AAGCGGTGCT TACCCTGGCC
AATGGCGAGG TAATTGACCT GAGCAGTGAC AAAAACGGCA TTGTTATCCA GGCCGGCCAG
CTGGCTTATA GCGATGGAAC TGAAATTAAG ACCAATGGTT CAAACGCTTC AGAAGAACCT
GCACAGCTCA ATACCATTGC TACTCCTGTA GGCGGACAGT ACCAGGTTAT TTTGCAGGAC
GGCACAAAAG TTTGGCTAAA TGCAGCTTCA TCCCTTCGTT ACCCCAGCCG TTTTAACAGC
AAAGAACGTA ATGTAGAGAT CAGCGGGGAA GCATATTTCG ATGTAACACA TGATGAGAAA
AGACCTTTTA AAGTGCGTAG CAAAGGACAG CAGGTAGAAG TATTGGGTAC GGCTTTTAAC
ATTATGGCCT ACGATAATGA GGATATGGTT AAGACCACCC TATTGAGGGG TGCTGTACGG
GTAGCTGGGT TAGGCCCGCT AAAAACTAAA ATTGTGACGC TCCTGCCTGG CCAGCAATCA
CTTTTAACAA CACAACAGAT CAGCGTGAAC AACAATCCGG ATCTGGAAGA GGTGGTTTCC
TGGAAAAATG GCTATTTCAA GTTTAATGAA GACATTAAGA ATATCATGAA TAAAATTGCC
CGCTGGTATA ATATTGAGGT GGTTTACCGC CCGGGTGTAG ATCTTAGCCA GACCTTTTCG
GGTGAGGTTT CCAAATCAAG AAATGTTTCG GTACTCCTGA AAGTTATGGA GCTGACCGGT
AATGTGCATT TTAAAATAGA AGAAAGGAGG ATCATCGTTA TGCCCTGA
|
|---|
| Protein sequence | MEEKKAQTLL RKYLAGDCTE AEKALLESWY LQRELNDFPD LGTKERLQDK QQLFAMLEKT
HHPKKHNLYW LKLTAAAALA AVIFGLWFYT SQQTTINSNA RAVNKNDIAP GGNKAVLTLA
NGEVIDLSSD KNGIVIQAGQ LAYSDGTEIK TNGSNASEEP AQLNTIATPV GGQYQVILQD
GTKVWLNAAS SLRYPSRFNS KERNVEISGE AYFDVTHDEK RPFKVRSKGQ QVEVLGTAFN
IMAYDNEDMV KTTLLRGAVR VAGLGPLKTK IVTLLPGQQS LLTTQQISVN NNPDLEEVVS
WKNGYFKFNE DIKNIMNKIA RWYNIEVVYR PGVDLSQTFS GEVSKSRNVS VLLKVMELTG
NVHFKIEERR IIVMP
|
|---|
| |