| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3379 |
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| Symbol | |
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| ID | 8254498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4017646 |
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| End bp | 4018503 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644937031 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093635 |
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| Protein GI | 255533263 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4275] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGA TTACCAGAGA AAGACCAAAA ATAGACCGCA TTGCATGCCC CTGGCTAATC
AAAAATTTTA TTGATGAAGA TGCTCATTTC TTTTACGTTC CGTTTGATCA GGTAATTGAA
AAAGCTGCAG CATTGAATGC TATTCCCTTT GATGTTCCCG GTGTTGAATT TACACATCAA
AAAGATCAAT GTACTTTTGA TGTACTGATT AAAAAGTACA AAATAAATGA TCCGGCAATA
GCTATAATGG CTCCAATTGT ACGAGGTGCA GACACTGACC AGCATCACTT ATCCGGCCAG
TGTGCCGGGT TATGGGCAAT TGCTGCCGGC ATGGCTTACA ACATCAAAGA TGATGTAGAG
TTACTACAGG CTGGAACAGT TATTTACGAT GCCTTATATA CCTGGGCCAG ACACCTACAA
AATGTAAAAC ATACAGAGAG TCCGGTTGAA CAAATATTAG TTGATGTTTA CCAAAAGTTC
CTCAAAAAAG GAAGTACAGG TAAAATACCT GCCTGGGCAA CGGAGTTAAA AACCATCATT
CAAGATCAGA TTGATACTAA CCTTGCCCTA AGCCTTACAG ATATCTCTAA TGAACTAAAT
GTCAACCCAG CCTACGTGTC AAGAGAATTC TCTAAATATT TTGATAATCT TTCCTTTGGC
GAGTACATTC GAAAACTACG GATAAATAAA GCAAAAACCT ATATGGAAAC CAGTGCATAC
AGTTTATCAG AAATAGCCTA TCTGACAGGC TTTTCAGACC AAAGCCATTT CGCACGTATT
TTTAAGTTGG AAACTGGAAA AACACCTTCT GTTTACAAAA AGAATATTTC AAAAGGTAAA
ATACGTCCTA ATAGTTAA
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| Protein sequence | MNWITRERPK IDRIACPWLI KNFIDEDAHF FYVPFDQVIE KAAALNAIPF DVPGVEFTHQ
KDQCTFDVLI KKYKINDPAI AIMAPIVRGA DTDQHHLSGQ CAGLWAIAAG MAYNIKDDVE
LLQAGTVIYD ALYTWARHLQ NVKHTESPVE QILVDVYQKF LKKGSTGKIP AWATELKTII
QDQIDTNLAL SLTDISNELN VNPAYVSREF SKYFDNLSFG EYIRKLRINK AKTYMETSAY
SLSEIAYLTG FSDQSHFARI FKLETGKTPS VYKKNISKGK IRPNS
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