| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3372 |
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| Symbol | |
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| ID | 8254491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4009815 |
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| End bp | 4011464 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937024 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093628 |
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| Protein GI | 255533256 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TCAATTACAA TATCAAACAC AGTTTTACAT TGCTCGTTGC AATACTTTTA
CTTGCACAAG GATGCAAGAA AGCCCTGGAA AAATCTCCGC TGGATAAATT TGACAGTGCC
AACTTCTGGA CAAGTGAATC CAATACCCAG CTGGCCTTAA CAGGTGTTTA CCGTGGAAAC
ATTAAAATCA ATGGCACTGA AGTGCTGGCC AGCGACTGGT GGTCTTATGC AGGGCTATTA
TTTACCGAAT TTTCTACAGA CAATGCCTAC GACAGAAGGG GCGATAATTC CTCCTATAAT
AAATTGTCAA ATGGTACACT AACTGCAAAT CTGGATGTCT TTAAAAGTTA TTGGTCCAGT
AGTTACGCCA AAGTGGCCAG AGCCAACTAT TTTCTGGAAA ACGTAGATAA AGCACCGATA
GATCCAACCC GAAAAAAACG CTACATTGCC GAAGTCCGGT TTATCAGGGC CTGTCAGTAT
TTTTACACAG CTCAGTACTG GGGTGCAGCA CCACTTGTTA CCAAAACTTT GACGGCACAA
GAGGCCAATA CCGTTACAAA GGCCAGCAAA GCAGAAATTG TTAAATTCGT TATTGATGAG
CTAAAAGCTG CTATAGCTGA CCTGCCACGG CATAAGGATA TCCCCAAGGC TGAACTTGGA
AGGGCGAGCA GACAGGCTGC GCTGGCATTT TTAGGCCGTT TATACCTTGC TGAACAAAAA
TACAGCGATG CAGCTGCTGC ATATAAAGAA ATCATAGATT ATGGGGATAA CATTATCGAC
CCTGATTATG CAGGGCTATT CCAAACCTCC AACGAAAATA GTAATGAGAT CATTTTCAGT
ACCCAATTCA TAGAAAATCT TAGCGCTAAT GCGATGAACC AGCATTTCTT TCCAGCAGTT
GCCGCAGGCT GGCACATCTT CTGCCCTTTG GGGAGCATTG TTGAAACCTA TGAATTTAAG
GATGGTACGC CCTTTTCTTA TACAGATCCG AGATATAATG CCGCCGATAT TGGAAAAGAC
AGGGATCCGC GTTTAAAATA TAGTGTATTG TATAACCTCA ATACCTTTAA AAATCTGAAA
TATGTTACCC ATCCCGATTC TGCCACTTCT CCAGACCAGT TAGGTGCAGG TAAACAAACC
ACGCAAACCG GTTATGGCCT CAAAAAGTTC TGCGATGAAA GTTTCTCTGG AAGCCTGACC
AATTATGGCG GTAATTTGCC CATAATCCGC TATGCAGAAG TATTGTTAAG TTACCTGGAA
GCAAAGCTTG AAGCCGGAGA CCCTATTGAC CAAATCCTGC TTGATGCCAC CATTAATAAA
GTAAGGTCAA GAGCCACTGT AAACCTGCCC CCGGTTACAG TTACAAATAC TACCGATCTG
CGTACAAAAT TACGTAGAGA ACGTCGTGTA GAGCTGGCAT TTGAGGGCAT CAGGTATTGG
GACCTGATCA GGTGGAAGAT CGGAAACACT GTTTTAAACG GCGACTTTTA TGGAGCGCCA
TTTCCGGGAG CAGTTAAGAC GAGAAAAAAA GGAAATATTA CAGATCCATA CAGCAGGTGG
TATGTCACTT CAAAAGCATT CAGGGTAACC GACCACGTTT GGCCTATACC GCAAAGCGAA
GTAAATATAA ATCCCGGACT GGCCAATTAA
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| Protein sequence | MKNLNYNIKH SFTLLVAILL LAQGCKKALE KSPLDKFDSA NFWTSESNTQ LALTGVYRGN
IKINGTEVLA SDWWSYAGLL FTEFSTDNAY DRRGDNSSYN KLSNGTLTAN LDVFKSYWSS
SYAKVARANY FLENVDKAPI DPTRKKRYIA EVRFIRACQY FYTAQYWGAA PLVTKTLTAQ
EANTVTKASK AEIVKFVIDE LKAAIADLPR HKDIPKAELG RASRQAALAF LGRLYLAEQK
YSDAAAAYKE IIDYGDNIID PDYAGLFQTS NENSNEIIFS TQFIENLSAN AMNQHFFPAV
AAGWHIFCPL GSIVETYEFK DGTPFSYTDP RYNAADIGKD RDPRLKYSVL YNLNTFKNLK
YVTHPDSATS PDQLGAGKQT TQTGYGLKKF CDESFSGSLT NYGGNLPIIR YAEVLLSYLE
AKLEAGDPID QILLDATINK VRSRATVNLP PVTVTNTTDL RTKLRRERRV ELAFEGIRYW
DLIRWKIGNT VLNGDFYGAP FPGAVKTRKK GNITDPYSRW YVTSKAFRVT DHVWPIPQSE
VNINPGLAN
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