| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3371 |
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| Symbol | |
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| ID | 8254490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4006695 |
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| End bp | 4009805 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937023 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093627 |
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| Protein GI | 255533255 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATT TTATTAAACC AAGGCAGTTC CTAACTGCCA GGTTTGTACC GCTGTATGTA
TTTTTTCTGC TCTCTTTCTC TTTAAACACA TCAGCACAAG TTACTACACA ACCACTCATC
AATTCTACAC TCAATGGTAC CGTCAAAGAT GCAAAAACGG GCGAAACACT ACCCGGAGCA
CTGATCAAGA TAGAAGGGAC CTCTCATCAG GTAACGGCAG ACCATGCCGG AAAATTCCGT
TTCGTTACAG GTCAGAAATT TCCATATACC CTGATTGTAA ACTATGTTGG CTATGACCAG
GTAAAACTGT TTGTTGATGG GAGCCCTGTA GAAATACGGT TAACCGCTAC ACAAAACCAG
CTCGGTGAAG TTGTAGTGGT TGGATATGGC ACCCAGAAAA AACAAGATGT AATTGGCTCT
ATTTCACAAA TTTCGGCAAA CAAAATCAAT AACCGGCAAA CCCCACAGCT TTCGAATGCA
TTAACAGGGC AGCTATCCGG CGTAACAGTA ATTCAAAGGT CAGGCAAGCC TGGTGCCGGT
AGCGGCGATA TTAATATCCG TGGTGTAGGT TCCTTTGGTG CAGCAACTAC ACCGCTGATT
ATTGTAGATG GAATACCTGC AAGTAATTTC AATGAAATTG ACCCTAATGA TGTAGCCTCA
GTTTCTGTAT TAAAAGATGC ATCCTCTGCA GCAATATATG GTGCACGTGC AGCAAACGGT
GTAGTGCTCA TCACTACAAA AAATGGGAAA GCCGGTAAAA CCCGGATAAG CTACAATGCA
TATGCAGGTT TCCAAAAAGC AACAGCTTAT CCGGAATTTG TCAATTCCTG GGAATTCGCC
GAACTCTATA ATGAGGCTTC AGGTTCGCAG TCCTACACAC CTGCAGACAT TCAGAAGTAC
AGAGATGGCA GTAATCCGGA TTTGTTTCCA AATACCAATT TTATTGACGC CGTACTTAGT
AAAAATGGCA TTCAAACCGC CCATAACATT ACTGCAAGCG GTGGAACCGA AAAAAACCAG
TTCAATATAT CGGGCGGCTA TTTATTCCAG GATGGACTGG TGGTTAAAAA TTACTACAAT
AAATACAACC TACGCTTAAA CCTGGTTAAC GAATTGAGCC CTAAACTTAC GCTTACAACA
CGTATATCTG CCATCAATTC GGATGCCAAT GAGCCCGGTA CACCGGCAAC CTTAGATGCC
AATGGAGTAT TGGGTATCAT CAGTTCAACT GTAAGGTACC CTGCCATTTA TGCCGGAAAA
CTATCTGACG GAACTTATGG ACTGGGCGTT GTACAAAAGG GCACGCCAAT TTCATTCCTT
GAAACTGAAT CGTTTACAAA AACCAAAAAT CAAAACCTAA GTGCAAACCT CAGGTTGGAT
TATCAGGCTG TTCCTGAACT AAAGCTATCC ATTTTGGGTG CTTATAACCA ACTTACAAAC
AACCAGAAGG ATTTTTCTGC ATCCCAGGTG CTTAATCCAA CACTTACACT GGGGCCCAAT
CAGCTCAGCA TTTCTACTGG AAACACCCAG TATAAAACCC TTCAATTGCT GGCAGACTAT
ACAAAAACCA TCAATAAACA TGCATTTGGT CTGTTAGCAG GCGCATCTTA TGAGGATAAC
CATACCGAAT CTCTCGATGC TTCCAGAGAT AAACTTCCCG GAAATGATTT AACCGAAATT
AATGTTGGGG CACAGGACAA TCAGAAAAAT GCAGGAACAG CTTCCGAATG GGCAATACAA
TCGGTATTTG GTCGTCTGAA ATATAATTTT GACCAGCGCT ACCTTTTTGA AGGAACAATC
AGGTATGATG GTTCATCAAG ATTCCCAACC ACCAGCAAAT ACGCCTTTTT TCCATCTGCA
GCGATAGGCT GGCGTATTTC ACAGGAAAAA TTTATCAAGG ATAAGATCTC CTGGCTTAAC
GACCTTAAAC TTCGTGCTTC TTATGGAATA CTTGGTAACC AGAACATTGC CAACTATCCT
TACCAGAATA CGCTGAATAC AGGGGTTAAC TATTCATTTG GTGGCGTAAT TTCCTCTGGT
GTAGCCTTAA CGCAATTAAC GGACCCAAAC TTGCATTGGG AATCGACCAG AACGGCTGAT
ATAGGCATTG ATGTAAGTTT GTTTAAAGGA AAACTAAATG CGGGTGCTAC TTATTTTGAC
CGCAATACTT ATGACATCCT TTATAGCCCG GCATCCAGCG TATCTACCAT CCTGGGCTTC
GATCTTTCTC AGCAAAACAC AGGAAAGCTT GTGAATAAAG GACTTGAATT TACGCTTGAC
CACATCAACA CTGTTGGGGC ATTTACTTAT AACATCAATG CCAATCTTAC CATTATCAAT
AACAAAGTTA AAGATCTGGG GGTTGGAAAC ATTCGTCAGC CAAATGGTTT AACCGGCAAT
GGGAGTTCTT TGTTTATCGG CCACCCTTTA GAACTATATT ACGGGTATAT CGCCGACGGG
CTTTTTGTTG ATGCGGCCGA TGTAGGTACC TGGCCAAACA TGACAGCAAT AAATCCATCG
GCCAAACCGG GTGATATCCG GTATAAGGAT ATCAGTGGTC CGGATGGTGT ACCGGACGGG
AAGGTTGATG CCACTTATGA CCGGGCTGTA CTGGGCAGCA GGATCCCGAA ATATTCCTAT
GGGATAAACC TCGGTGCTGC CTATAAAGGA TTTGATTTTA ATGTGTTGTT TCAAGGAATA
GCAGGTGTTA AAGGAACACT GGATTCTTAC GCCGGCTATG CCTTCAATAA CTTCGGCAAC
GTGCAAACCT GGCAAAAAGA TGAACGCTGG ACGGCCGACA ATCCCAGGAG AGATGCAGGA
TATCCACGAC TGGAAATCAT TTCCAATTCT GGAACACCGA ATACCCTTAC CTCTTCTTTC
TGGATCATTA ACACTTCTTA CATCAAAATT AAAAGTGCGC AGCTTGGCTA TACCTTACCA
GGCCCGGTAT CTGCAAAAGC AGGGTTGTCA AAAGCCAGAA TATACCTCAG TGGAGAGAAC
TTCCTGAACT GGAACAATTA TAGAAAAGGC TGGGATCCGG AAATCAATAC GGGCGGAAGC
TATTATCCAA TCCTGGCAAC CTATACTGTT GGTCTGAATG TAACTTTTTA A
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| Protein sequence | MQNFIKPRQF LTARFVPLYV FFLLSFSLNT SAQVTTQPLI NSTLNGTVKD AKTGETLPGA
LIKIEGTSHQ VTADHAGKFR FVTGQKFPYT LIVNYVGYDQ VKLFVDGSPV EIRLTATQNQ
LGEVVVVGYG TQKKQDVIGS ISQISANKIN NRQTPQLSNA LTGQLSGVTV IQRSGKPGAG
SGDINIRGVG SFGAATTPLI IVDGIPASNF NEIDPNDVAS VSVLKDASSA AIYGARAANG
VVLITTKNGK AGKTRISYNA YAGFQKATAY PEFVNSWEFA ELYNEASGSQ SYTPADIQKY
RDGSNPDLFP NTNFIDAVLS KNGIQTAHNI TASGGTEKNQ FNISGGYLFQ DGLVVKNYYN
KYNLRLNLVN ELSPKLTLTT RISAINSDAN EPGTPATLDA NGVLGIISST VRYPAIYAGK
LSDGTYGLGV VQKGTPISFL ETESFTKTKN QNLSANLRLD YQAVPELKLS ILGAYNQLTN
NQKDFSASQV LNPTLTLGPN QLSISTGNTQ YKTLQLLADY TKTINKHAFG LLAGASYEDN
HTESLDASRD KLPGNDLTEI NVGAQDNQKN AGTASEWAIQ SVFGRLKYNF DQRYLFEGTI
RYDGSSRFPT TSKYAFFPSA AIGWRISQEK FIKDKISWLN DLKLRASYGI LGNQNIANYP
YQNTLNTGVN YSFGGVISSG VALTQLTDPN LHWESTRTAD IGIDVSLFKG KLNAGATYFD
RNTYDILYSP ASSVSTILGF DLSQQNTGKL VNKGLEFTLD HINTVGAFTY NINANLTIIN
NKVKDLGVGN IRQPNGLTGN GSSLFIGHPL ELYYGYIADG LFVDAADVGT WPNMTAINPS
AKPGDIRYKD ISGPDGVPDG KVDATYDRAV LGSRIPKYSY GINLGAAYKG FDFNVLFQGI
AGVKGTLDSY AGYAFNNFGN VQTWQKDERW TADNPRRDAG YPRLEIISNS GTPNTLTSSF
WIINTSYIKI KSAQLGYTLP GPVSAKAGLS KARIYLSGEN FLNWNNYRKG WDPEINTGGS
YYPILATYTV GLNVTF
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