| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3368 |
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| Symbol | |
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| ID | 8254487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3999284 |
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| End bp | 4000525 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937020 |
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| Product | L-fucose transporter |
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| Protein accession | YP_003093624 |
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| Protein GI | 255533252 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAT TAAAAACCAA AGCTCCTTTT ACGGAGCGGA AATTTCTTGT TACCCTGGTA
TTCGTTACAT CTCTGTTTAT GTTCTGGGGT ATTGCCATTA CCATGGCCGA TGTGCTGAAT
AAACATTTCC AACTTACGAT GAACCTTTCC AGGTCCCAAT CTGCCTTTGT ACAATTTGCT
GTTTTTGGTG CCTATGCAGT AATGGGCATA CCTGCCGGAT TATTTATGAA ACGTTTTGGT
TATAAAAAGG GGGTACTTTT AGGACTTTCC CTTTTTTCTT TAGGCGCTTT TCTGTTTATA
CCTGCCGCTA ACATCTCTTC TTTTGCTTTT TTTGGTATTG CCTTGTTTAT TGTTGGTTGT
GGCCTGTCTA CCCTGGAAAC GGTTGCACAT CCTTTTGTTG CTTCGCTGGG AGATCAGCGT
ACCAGCGACC AGCGCATTAA TTTTGCACAG TCTTTTAATG CGGTAGGTGC CATGCTTGGA
CCTGCAATTG GCAGTTACTT TTTATTTGGC AAGCACATTG AAGGAAGTAC TGACTTAACC
TCCGTTAAGC TATTGTATGC GGTTATAGGA ATGGTGATCT TGCTTGTGGC AGTATTTTTT
TCATTTGTTA AGGTTCCGCC TACAACCGAT CCACATGTGA TTTCTGAAGC TGATGCTGAC
GCCGTGAATG TTGACGTGGC GCCTGATAGA AAACTAATTG ACCATAAACA TTTTGTATGG
GCTGTTGCTG CACAGTTTTT TAATGTTGCT GCACAAGCCG GAACCTGGGC CTTTTTTATC
AATTACGGAC ATGAAAAAAT GGGCTTTAGT GACGAAAAAG CCGGACATTT TATGGTAGTT
TTTATGGGGA TGATGCTTGC CGGGCGTTTT ATCGGGACCT TTTTAATGCG CATCATTGCA
CCTCATAAAT TATTGGCAGC ATTTGCATTG GGCAATATCC TGATGTGCAT CATAGTAGCG
CAAAATTTTG GATTGGTATC CTTCATTGCT TTGCTCATGA TCAACTTCTT TTTTAGCATC
ATGTTTCCAA CCATATTTAG CCTGGGGCTG AAGAATTTAG GTGCCCGTAC TCAACAGGCA
GCTTCGTTTT TATCGATGGG GGTTGTAGGC GGTGCATTTT TTCCTTTTGT AATGGGAGTT
ATTGCTGACA ATGCAGGGAT TGCAAATGCT TATTATGCAC CCATTATCTG CTATGTGATA
ATTTTCCTTT TTGCTTATAA ATTTTATAAA GTAAAGCATT AA
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| Protein sequence | MNQLKTKAPF TERKFLVTLV FVTSLFMFWG IAITMADVLN KHFQLTMNLS RSQSAFVQFA
VFGAYAVMGI PAGLFMKRFG YKKGVLLGLS LFSLGAFLFI PAANISSFAF FGIALFIVGC
GLSTLETVAH PFVASLGDQR TSDQRINFAQ SFNAVGAMLG PAIGSYFLFG KHIEGSTDLT
SVKLLYAVIG MVILLVAVFF SFVKVPPTTD PHVISEADAD AVNVDVAPDR KLIDHKHFVW
AVAAQFFNVA AQAGTWAFFI NYGHEKMGFS DEKAGHFMVV FMGMMLAGRF IGTFLMRIIA
PHKLLAAFAL GNILMCIIVA QNFGLVSFIA LLMINFFFSI MFPTIFSLGL KNLGARTQQA
ASFLSMGVVG GAFFPFVMGV IADNAGIANA YYAPIICYVI IFLFAYKFYK VKH
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