| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3363 |
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| Symbol | |
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| ID | 8254482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3988981 |
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| End bp | 3992112 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937015 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093619 |
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| Protein GI | 255533247 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0179499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.688062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA ACAAGTACTT ATTAATGCTA TTTTTTCTTT TTCCTATGTA TGTATGCGCC
CAGCAGCAGA TTACGGGAAA AGTTACGGAT GTAAGAGGGG AACCCATACC TGGAGTTGGG
GTAAGCGCAA TGACAGATGG GCAAAGATTT AATGCGGTAA CCACTTCAAC TGGTGATTAT
TCCATAAAAG TTGCTAACAA TACTAAGCAA TTGACTTTCT CTTATATTGG AATGACGTCC
CAGACGGAGA CAATAAACGG ACGTACGGTT GTAAATGTTC AGCTCTCTGA AGAAAGCAGG
GAACTGCAAA GTGTGGTGGT GACGGCTTTA GGCATAAAAA GGGAAGCCAA AGCTTTGAGT
TATTCCAGAC AAAGTATGGA TGTATCTACA TTGACCCAGG CACCCACTAC AAATATTGTT
TCTTCACTTT CGGGGAGGAT TGCAGGAGTT CAGGTTACAC CTGCTTCCAG TAATACAGGG
TCTGCAAGAA TAATTATCCG GGGTAACAAC TCGATCACTG GGAATAATCA GCCTTTATTT
GTTATTGATG GGATACCGGT GGATAACGAG ACCGGAGATA CCAAGGTAAC CACATCTGGA
AATAACAATT TGGATTATGG CAATATTGCA GGGAACATTA ACCCTGAGGA TATTGAAAAT
ATAGAAGTGC TGAAAGGACC AAATGCTGCT GCATTGTATG GGTCGAGGGC GGCTAACGGG
GCAATTCTGA TCACCACTAA AAAATCTGCC GGAACAAAGT TTAAGGTAAC GTTTAACTCC
AATTCAACAT TTCAGCGGAT CACTGAATTT CCTGACTATC AGAATATGTT TGGTGCAGGA
AATAGTTTTA AACTTGATGG CTCCGGATCT ACCAGTAACC CGGATAGAAT ACCCAGCTTA
AATGTATTTA ACAGGAGTTG GGGAGCACCA TTTTTGGGTC AGCCGGTTAT CAGTGTAAAT
GGTTCGCCAA AGGCATATCT GGCGCAACCA GATAACGTAA GGGATTTTTA TAGCACCGCG
GCAATGCTTA CCAATTCTTT GGCCATAGAT GGGGGCAATG CAGAAAATAA TTACAGGTTT
TCTTATACCA ATTATACCGG TGGAAGTGTA GTAAAGAACA TCAACGATAA CATCAGACAC
AACGCCAATA TCAGGGTGCT CAATAAATTT ACAAAATGGC TTGATATGGA TTCTAAGGTT
ACTTTTATTA ATAATAAAGT AACGAACAGA CAATATATGA ACGGAAGTTC CAAAAACCCG
GTTTATCAAT ATGCCTATAT GGTTCGTGAT GACCAGTTGT CGGAATTTAA AAATTATAAA
GACCAGTACG GTAATGAGAT CAATACCCAT ACGGATTTCC TTAATCCCTA TTGGGCCATC
AATGAAAATC CCAATGAAGA CACCAAAAAT CAACTTTTAG GCGCGTTTAA TGTGAATGCC
AGAATAAACG GATGGTTAAG GCTAACCGCA AAGGTGGGAA CCGAAATGTA TTGGGTGGAT
GGTTATACCT TTAACAATAA AGGGGCGCAA AGCAGTCCTA ATGGTAGTAT GAGTACCATA
AACAATAGCC TGCAAAGTAC AAATGCCGAC CTGGTTTTGT TTGCAAATAA TAAGTTTGGA
AAGCTTTCTG TAAATTCATT TGTAGGGACC GGACGTTTTC AAACCTCAAA TAAAAAGAAT
GAACAGCGCA TCAATTCGCT TATCCAGGCA GGATTGATCA ATCTTTCCAA CACGGGAGAA
TTTCCTGCCG TAACGCAGTT TGCCTCAAAA AAGATCATCA ATTCGGTATA TGGTTCTATG
TCTTTTGGAT ATAACAGCTA TCTTTTTATG GATGTAACGG CAAGAAATGA CTGGTCGTCA
ACGTTGCCTA AGGCGAATAA TTCTTATTTC TATCCATCAA TTGGGGGTTC CTTTGTTTTT
ACTGATGCAT TTAAAGATAT TCCAAAAAGT ATATTGTCAT TTGGAAAAGT AAGGGCTTCG
TATGCCATTG TGGGTAATGA TACCAGTCCT TATCAACTTG CCCCTACTTA TTCTTTTAAT
GGGATTTATA ATGGTCAGGC CTATGCTGCA CTGGCCTCAA CGTTTTTTAA CCCAGATTTG
AAACCTGAAA AGACAGCCTC TTTGGAATTT GGTATAGATC TTAGATTTTT AAAAGACAGG
TTGACGTTTG GAGCAACCCA TTATAAAACA TCAACTACCA ATCAGATCCT GACAGCTCAG
ATAACTCCAA CAAGCGGCTA CAATAGAAAA TATTATAATG CCGGTGAAAT TCAGAATTGG
GGAACTGAGT TTACCTTGTC TGGAACCCCA TTAAAAAGCA AAAAACTGGA GTGGAACATG
TTTGCAAATT ATGGACAGAA CAATTCGAAG GTAAAAAGCT TAGTTGATGG TGTGAATAGT
TTTCAGCTAA ACTCCTGGTT TGGCAGATTA CTGGTTTTTG CGGAGGTAGA CCAACCTTAT
AGTGTAATAA GAGGAGCTGG CTGGCAGCGT GATGAACAGG GTCGCAAACT GGTGGCAGCA
AGTGGACTTC CGATAGCACA AGGTAATTTG GTTTTAGGTA ATGCTATGCC AGACTGGACC
GGAGGATTTG GGAATTCCCT GCGTTATCAA AATTTTGGTT TGAGCTTTTT GATAGATATA
CGTAAAGGTG GTAGTTTTTA TTCTGGTACG TATAGGCGGT CATATATTTC AGGTGCTATC
AGCAACACAC TTGAAGGGCG TGAGGATTAT TATTTACACA GCTATATTTA CGGTGAAAGT
GCAGCTAACT TAACGGCTGG TTTTATTTAT AAGGATGCTT ATTTTGAAGA CGGTACTCCC
AACAATAAGT ATATTACCCC CCAGTCAAAC GGGTTTTCTA ATCTGGATGA GCTCCAAATC
TTTGATGCTT CTTTTGTGAA ATTAAGAGAG ACCGTAATCA GTTATAACCT TACCAGCCCA
TTCTTTAAAA AACTAAAAGT TTCTAATGCC CGGATTTCTT TGTCAGGCAG AAATTTATGG
ACTATTTATA AAAAGGCACC CAAAGGCATT GACCCTGAAT CAAGTGTAAC CTCGGGGAAT
GGACAAGGTA TAGAATATGG TTCTTTACCA CCTTTTACTA CTTATGGATT AGATCTAAGG
TTGACTTTTT AA
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| Protein sequence | MKANKYLLML FFLFPMYVCA QQQITGKVTD VRGEPIPGVG VSAMTDGQRF NAVTTSTGDY
SIKVANNTKQ LTFSYIGMTS QTETINGRTV VNVQLSEESR ELQSVVVTAL GIKREAKALS
YSRQSMDVST LTQAPTTNIV SSLSGRIAGV QVTPASSNTG SARIIIRGNN SITGNNQPLF
VIDGIPVDNE TGDTKVTTSG NNNLDYGNIA GNINPEDIEN IEVLKGPNAA ALYGSRAANG
AILITTKKSA GTKFKVTFNS NSTFQRITEF PDYQNMFGAG NSFKLDGSGS TSNPDRIPSL
NVFNRSWGAP FLGQPVISVN GSPKAYLAQP DNVRDFYSTA AMLTNSLAID GGNAENNYRF
SYTNYTGGSV VKNINDNIRH NANIRVLNKF TKWLDMDSKV TFINNKVTNR QYMNGSSKNP
VYQYAYMVRD DQLSEFKNYK DQYGNEINTH TDFLNPYWAI NENPNEDTKN QLLGAFNVNA
RINGWLRLTA KVGTEMYWVD GYTFNNKGAQ SSPNGSMSTI NNSLQSTNAD LVLFANNKFG
KLSVNSFVGT GRFQTSNKKN EQRINSLIQA GLINLSNTGE FPAVTQFASK KIINSVYGSM
SFGYNSYLFM DVTARNDWSS TLPKANNSYF YPSIGGSFVF TDAFKDIPKS ILSFGKVRAS
YAIVGNDTSP YQLAPTYSFN GIYNGQAYAA LASTFFNPDL KPEKTASLEF GIDLRFLKDR
LTFGATHYKT STTNQILTAQ ITPTSGYNRK YYNAGEIQNW GTEFTLSGTP LKSKKLEWNM
FANYGQNNSK VKSLVDGVNS FQLNSWFGRL LVFAEVDQPY SVIRGAGWQR DEQGRKLVAA
SGLPIAQGNL VLGNAMPDWT GGFGNSLRYQ NFGLSFLIDI RKGGSFYSGT YRRSYISGAI
SNTLEGREDY YLHSYIYGES AANLTAGFIY KDAYFEDGTP NNKYITPQSN GFSNLDELQI
FDASFVKLRE TVISYNLTSP FFKKLKVSNA RISLSGRNLW TIYKKAPKGI DPESSVTSGN
GQGIEYGSLP PFTTYGLDLR LTF
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