Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3360 |
Symbol | |
ID | 8254479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3984579 |
End bp | 3986225 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937012 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_003093616 |
Protein GI | 255533244 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.263432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.164885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCA GGAAATTATT ATTGTGGATA TTTTTTGTCA GTTCCTTATC CAGTATAGCT CAAAATAAAA GTTCAAATAA ATTGCCCCGC CCTAAGCTGG TAGTGGGGCT GGTAGTAGAC CAGATGCGTT GGGATTATTT GTATAGATAT TACGAGCGCT ATCAGCAAAA TGGGTTCAAG CGCTTGCTTA ACGAAGGGTT TTCATGTGAA AATACTTTTA TCGACTATGT ACCTACCGTA ACTGGTATAG GCCATAGTAC CATTTATACT GGCTCGGTTC CTGCAATACA TGGTATTGCG GGTAATGACT TTATCATCAA TGCTACAGGT AAAACCGTTT ACTGCGCAGG CGATTCAACG GTCGAAACCG TGGGTAGTAA ATCTAAGTCC GGCAAGATGT CGCCAAGAAA TTTACTGGCC AATACCATTG GAGATGAATT GAAACTGGCT ACAAATTTTA AATCTAAAGT AATTGGTATT GCATTGAAAG ACAGGGGCGG TATTTTACCT GCTGGCCACA GTGCCGATGC AGCCTATTGG TTTGATTCAG GATCAGGAAA CTGGATTACA AGCACCTATT ATATGAATGA TCTGCCTGCC TGGCTGAAAA AGTTTAATGA AAAGAAACTA CCTGCAAAAT ACCTAAGCGA GGATTGGAAT ACCTTGTATG ACATTAAAAC TTATACACAG AGTACTAAAG ATGACACCCC TTATGAAGGT TTATTTGATG GACAAAATAC ACCTACATTT CCTATAAAAA CTTCTCAGAT GATGAGTAAA GGGTATGACA TACTCCGTTC TACCCCTTAT GGAAGCACAT TTACCCTGGA CCTGGCAAAA GCAACTATAG ACAATGAGTA TTTGGGACAG GGTGAATTTA CCGATATGCT GGCCATAAGC ATTTCGCCAC CTGATTATGT AGGGCATAAA TTTGGCGTAA ATGCCATAGA GACTGAAGAT ACCTATTTAA GATTGGACAA AGACATTGCT GAATTTTTGA CGTATTTGGA TGCTAAGGTA GGGAAAGGGA ATTATACCTT GTTTTTAAGT GCTGATCATG GAGCTGCCCA TAATGTTAAG TTTAGTAACG ATAATAAATT ACCTTCTTCC AACTGGTCTG GCAGTAAGGT GCAACGCGAA ATGAACCAGG CCCTGGAAGA TGTTTTTAAA GTGAAAGACA TTGTATTGAG TATGATGAAT GCCCAGGTCC ATTTTAACTA TAATGTGATC AAATCCAATA AGCTTAATGA AGAGGCCATC AGAAAAGTGT GCGTTGCCTA TTTAAAAACT CAGAAAGAAA TCGCTTTTGT TGTAGATCTG GATAAAGTGG GGGATGCCAG CGTGCCTGAG GAAATAAAAA GAAGGATTAT AAATGGGCAT AATGCACATC GCTCAGGGGG GATACAGCTT ATCCTGGATC CCGCAGTTTT TTCAACAGGA CGTACCGGTA CCTCGCACAG TGCGTGGAAC CCTTATGACT CCCACATTCC CCTGGTTTGG ATGGGCTGGG GCATCAGTCA GGGACGTACA AACAGACAAA CAAATATGAC AGATATTTCT GCTACACTGG CTGCATTGCT TAGGATCCAA ATGCCGAACG GCTGTATTGG TTATGCCATT AACGAAGTAT TGAAAAAAGA CAATTGA
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Protein sequence | MRIRKLLLWI FFVSSLSSIA QNKSSNKLPR PKLVVGLVVD QMRWDYLYRY YERYQQNGFK RLLNEGFSCE NTFIDYVPTV TGIGHSTIYT GSVPAIHGIA GNDFIINATG KTVYCAGDST VETVGSKSKS GKMSPRNLLA NTIGDELKLA TNFKSKVIGI ALKDRGGILP AGHSADAAYW FDSGSGNWIT STYYMNDLPA WLKKFNEKKL PAKYLSEDWN TLYDIKTYTQ STKDDTPYEG LFDGQNTPTF PIKTSQMMSK GYDILRSTPY GSTFTLDLAK ATIDNEYLGQ GEFTDMLAIS ISPPDYVGHK FGVNAIETED TYLRLDKDIA EFLTYLDAKV GKGNYTLFLS ADHGAAHNVK FSNDNKLPSS NWSGSKVQRE MNQALEDVFK VKDIVLSMMN AQVHFNYNVI KSNKLNEEAI RKVCVAYLKT QKEIAFVVDL DKVGDASVPE EIKRRIINGH NAHRSGGIQL ILDPAVFSTG RTGTSHSAWN PYDSHIPLVW MGWGISQGRT NRQTNMTDIS ATLAALLRIQ MPNGCIGYAI NEVLKKDN
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