Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3356 |
Symbol | |
ID | 8254475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3979121 |
End bp | 3979738 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937008 |
Product | putative acetyltransferase |
Protein accession | YP_003093612 |
Protein GI | 255533240 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0435273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATA CTGTATTAAT TGGCAATCAT GTTAAGCTGG AACCCCTGGC ATATGCCCAT GCCGCAGGCC TTGCTGAAGC TGCGGCATAC AACCCATCCT TGTTTAAGTG GACATTTGTT CCGCAGGGGA TAGCAGCAAT GCACAAATAT ATTGAAGTTG CACTTGCCGG AAAGGAAGCA GGCACGATGT TGCCCTATGC TATTGTAGGT ATAGCAGATG GAAAAGTAAA AGGATCGACA AGGTACTGGA ACATACAACA TTGGGCATGG CCCGAAAATG CTGTGTTTTA TGGAAAAGAA ACGCCCGACG TTTGTGAAAT AGGGCATACC TGGTTAACCG AAGCTGCGAT AAGAACACCG GTAAATACAG AATGTAAACT GTTGTTGCTG ACCAATGCCT TTGAAAACTG GAAAGCATTG CGGGTCTGTT TTCAAACAGA TGTACGTAAC GAACGGTCGC GCGCAGCAAT TGAGCGCATC GGTGGGAAAT TTGAAGGTGT TTTACGTGCA GAACGGCTTG GTGTGGACCA TACGATAAGG GATACGGCAC GTTTCTCTAT CATTTCGGCT GAATGGCCTG CAGTTAAAAA TAAACTGGTA AGCAGGTTAA AATCATGA
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Protein sequence | MEHTVLIGNH VKLEPLAYAH AAGLAEAAAY NPSLFKWTFV PQGIAAMHKY IEVALAGKEA GTMLPYAIVG IADGKVKGST RYWNIQHWAW PENAVFYGKE TPDVCEIGHT WLTEAAIRTP VNTECKLLLL TNAFENWKAL RVCFQTDVRN ERSRAAIERI GGKFEGVLRA ERLGVDHTIR DTARFSIISA EWPAVKNKLV SRLKS
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