Gene Phep_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3356 
Symbol 
ID8254475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3979121 
End bp3979738 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content45% 
IMG OID644937008 
Productputative acetyltransferase 
Protein accessionYP_003093612 
Protein GI255533240 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0435273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATA CTGTATTAAT TGGCAATCAT GTTAAGCTGG AACCCCTGGC ATATGCCCAT 
GCCGCAGGCC TTGCTGAAGC TGCGGCATAC AACCCATCCT TGTTTAAGTG GACATTTGTT
CCGCAGGGGA TAGCAGCAAT GCACAAATAT ATTGAAGTTG CACTTGCCGG AAAGGAAGCA
GGCACGATGT TGCCCTATGC TATTGTAGGT ATAGCAGATG GAAAAGTAAA AGGATCGACA
AGGTACTGGA ACATACAACA TTGGGCATGG CCCGAAAATG CTGTGTTTTA TGGAAAAGAA
ACGCCCGACG TTTGTGAAAT AGGGCATACC TGGTTAACCG AAGCTGCGAT AAGAACACCG
GTAAATACAG AATGTAAACT GTTGTTGCTG ACCAATGCCT TTGAAAACTG GAAAGCATTG
CGGGTCTGTT TTCAAACAGA TGTACGTAAC GAACGGTCGC GCGCAGCAAT TGAGCGCATC
GGTGGGAAAT TTGAAGGTGT TTTACGTGCA GAACGGCTTG GTGTGGACCA TACGATAAGG
GATACGGCAC GTTTCTCTAT CATTTCGGCT GAATGGCCTG CAGTTAAAAA TAAACTGGTA
AGCAGGTTAA AATCATGA
 
Protein sequence
MEHTVLIGNH VKLEPLAYAH AAGLAEAAAY NPSLFKWTFV PQGIAAMHKY IEVALAGKEA 
GTMLPYAIVG IADGKVKGST RYWNIQHWAW PENAVFYGKE TPDVCEIGHT WLTEAAIRTP
VNTECKLLLL TNAFENWKAL RVCFQTDVRN ERSRAAIERI GGKFEGVLRA ERLGVDHTIR
DTARFSIISA EWPAVKNKLV SRLKS