| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3352 |
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| Symbol | |
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| ID | 8254471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3975840 |
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| End bp | 3976214 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644937004 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003093608 |
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| Protein GI | 255533236 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.243152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTA GAGACAATAA GGCGATATAC CTTCAAATAG CAGAATACGT TTGTGAACAC
ATTTTATTGC AAAAGTGGAA TACTGATCAG AAGCTCCCTT CGGTAAGGGA GCTGGCCGTA
GAACTCGAGG TGAACCCCAA CACGGTAATG CGGACCTATG AATTGCTGCA AAGTAAAAAT
ATCATCAGTA ACAAAAGAGG CATTGGTTTT TTTGTGGCGG AGGATGCCCT TGCCCATGTG
AAAAACTATC GTAAAACCCA GTTTGTTGAT GATGAACTAC CCATTTTTTT TAGAAATCTT
TATTTGTTGA ATATAGATTT TGATGAATTG CAGACACGAT ATATCGCTTT TATCAAAGAA
ACTTTTAATC CTTAA
|
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| Protein sequence | MEFRDNKAIY LQIAEYVCEH ILLQKWNTDQ KLPSVRELAV ELEVNPNTVM RTYELLQSKN
IISNKRGIGF FVAEDALAHV KNYRKTQFVD DELPIFFRNL YLLNIDFDEL QTRYIAFIKE
TFNP
|
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