| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3330 |
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| Symbol | murE |
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| ID | 8254449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3950863 |
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| End bp | 3952320 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936982 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_003093586 |
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| Protein GI | 255533214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.972374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTGC AGGATATTTT ATATGGTGTA ACTATAACTG ACCAGATTGG TGTAACCAAC
AGGAAGGTAA GTGCTTTGGT ATTTGATTCC CGACAGGTTA TAAAAGATGC TGCATTTTTT
GCCATAAAGG GTACATTAGC TGATGGACAT ACCTATATTG CTGCTACAGT TAGCGCAGGT
GCCGGGGTAG TTATTTGCGA GGTATTACCA GCTGAAATTG CTCCTGATGT TACCTATATC
CAGGTAGCGA ACAGTGCTGT AGCATTGGGT AGGATGGCTG CTAATTTTTA TGGAAACCCT
TCTGAAAAAC TGCAGCTGAC TGGCATTACA GGTACAAATG GTAAAACAAC TATTGCCACA
TTGCTTTTTA AACTTTTCAG GGCATTGGGC TATAAAGTTG GTCTGATCTC AACTGTTGAA
AACCACATCA ATGATGAGGT TATTCCTGCA ACACATACTA CACCTGATCC GCTGGCTTTA
AATGCGCTTT TACAGGATAT GGTGGATGCA GGTTGTGATT ATTGTTTTAT GGAAGTGAGT
TCCCATGCTG TCGTTCAACA TAGAATAGAA GGTTTGAGCT TTGCTGGTGG GGTATTTTCT
AACATCACCC ATGATCATCT GGATTTTCAC AAAACCTTTG ATCAGTATAT AAAAGCCAAG
AAAGCATTTT TTGATGCCTT GCCGGCATCG GCTTTTGCAC TGACCAATCT GGACGATAAG
AATGGTATGG TCATGCTGCA GAATACAAGA GCTGCTAAAA AGACCTATGC CCTGAAGCAG
CTTGCTGATT TTAAGGCCAA GGTGATCGAG AATAGTTTTA AAGGTTTGCA CCTGGATATA
GATGATGCAG ATGTTTTCTT TAAACTGGTA GGATCTTTTA ACGCCTATAA CTTATTGGCT
GTTTATGGTA CAGCGGTATT GCTTGGTCAG GAGAAGCTGG ATGTGCTGAC TTTATTGAGT
AATTTAACCG GGGCAGAAGG CCGTTTTGAT TACATTACTT CCAGTCAGCA TATTATTGGA
ATAGTTGATT ATGCACATAC GCCTGATGCA GTTCAGAATG TGCTGAGTAC AATACAGGAT
ATCAGAAAAG GAACGGAGCA GGTAATTACC ATTATAGGTT GTGGTGGTGA CAGGGATAAG
ACCAAGCGTC CCATTATGGC CCAGGTAGCC TGCGACTGGA GTGATAAGGT GATCCTCACT
TCTGACAATC CAAGAACGGA AAACCCGCAA ACGATAGTGG AGGAAATGGA AAAAGGTGTT
TCGCCAACAA ACAAGCGTAA AACTTTAAGC ATAGTAGACA GAAAAGAGGC GATTAAAACA
GCATGTCATT TGGCCAGACC AGGTGATATT ATATTGCTGG CAGGAAAAGG ACATGAGAAA
TACCAGGAAA TAAATGGGGT GAGGTATCAT TTTGATGATA AGGAAATATT AACCGAACAA
CTAAACTTAA TCAGCTAA
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| Protein sequence | MQLQDILYGV TITDQIGVTN RKVSALVFDS RQVIKDAAFF AIKGTLADGH TYIAATVSAG
AGVVICEVLP AEIAPDVTYI QVANSAVALG RMAANFYGNP SEKLQLTGIT GTNGKTTIAT
LLFKLFRALG YKVGLISTVE NHINDEVIPA THTTPDPLAL NALLQDMVDA GCDYCFMEVS
SHAVVQHRIE GLSFAGGVFS NITHDHLDFH KTFDQYIKAK KAFFDALPAS AFALTNLDDK
NGMVMLQNTR AAKKTYALKQ LADFKAKVIE NSFKGLHLDI DDADVFFKLV GSFNAYNLLA
VYGTAVLLGQ EKLDVLTLLS NLTGAEGRFD YITSSQHIIG IVDYAHTPDA VQNVLSTIQD
IRKGTEQVIT IIGCGGDRDK TKRPIMAQVA CDWSDKVILT SDNPRTENPQ TIVEEMEKGV
SPTNKRKTLS IVDRKEAIKT ACHLARPGDI ILLAGKGHEK YQEINGVRYH FDDKEILTEQ
LNLIS
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