| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3328 |
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| Symbol | |
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| ID | 8254447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3948273 |
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| End bp | 3949616 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936980 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003093584 |
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| Protein GI | 255533212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.738785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA AAAGGATAGC AATTCTGGGA GCGGGAGAAA GCGGGGTAGG TGCAGCAATG
CTGGCACAGA AGCATGGTTA TGATGTATTC GTGTCAGATT TTGGTACAAT TCCTTCACAA
TACAAGGAAA AGCTTGAGGC ACTTAACATT GTATTTGAAG AAAACACGCA TACGGCAGCC
GAGATCCTGA AAGCGGTTGA AGTGATTAAA AGTCCCGGTA TACCTGATAC AGCCGGTATC
ATTAAAGAGA TAAGATCCCG GAATATTCCG GTGCTTTCTG AAATTGAATT TGCAAAACGG
TATACGAAAG CAAAAACTAT ATGCATTACG GGGTCTAATG GTAAGACCAC TACTACCATG
TTAACTTACC ATATTCTGAA AAATGCAGGT TTAAACGTAG GGCTTGCAGG GAATATCGGG
CATAGCTTTG CCGCGCAGGT GGCTAGTGCT GATTTTGACT GGTATGTACT GGAGATATCT
AGCTTTATGC TGGATGATAT GTATGATTTC AAAGCGGATA TTGCTGTGCT GTTAAACATA
ACACCCGATC ATTTAGACAG GTACGACTAT AAATTGGGTA ATTATGCTGC ATCAAAAATG
CGCATTACGC AAAATCAGAC CAGTGAAGAT ATTTTTATTT ACTGTGCTGA TGACGAAGAA
ACTTTAAAAG CGTTGAAAAA TGTTAAGGTG GATTCAAAAA CATATCCTTT TTCCATCCGG
AAAAAAATCG AAAAGGGAGC CTATCTGGAA AGCAACAACA TACACATCAA TATAAACCTA
AACGATCAAT TAACCATGTC TATTACAGAA TTAGCCCTGC AGGGAAAGCA CAATATTTAT
AACTCTATGG CATCGGGCAT AGTAGCTAAG GTATTAGATA TCAGAAATAC CGCTATACGC
GAGAGTATGG GGGATTTTAA AAATATTGAA CACAGGCTGG AGCATGTTGC GAGGATTTCC
GGTGTTGATT ATATCAACGA TTCAAAGGCA ACAAACGTAA ATTCTACCTG GTATGCGCTG
GAAAGTGTAG GGACTGATGT GATCCTGATT ATGGGTGGGG TAGATAAAGG AAACGATTAT
GATATGTTGA AGGATATGGT CCGTCAGAAG GTTAAGGCAA TTGTATGTTT AGGTAAAGAC
AATAAGCGGA TCCATGAGGC TTTTGAAGAT GATGTAGAAA TTATTGTAAA CACGTTTTCT
GCTCATGAGG CAGTTCAGGT GGCCTATCAT CTGGCCAAAA AAGGAAATAC AGTGCTGTTG
TCACCTGCTT GTGCAAGTTT TGACCTGTTT AAGAATTATG AGGACAGGGG CAACCAGTTT
AAGGCGGCAG TTAAAGAATT ATAG
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| Protein sequence | MEKKRIAILG AGESGVGAAM LAQKHGYDVF VSDFGTIPSQ YKEKLEALNI VFEENTHTAA
EILKAVEVIK SPGIPDTAGI IKEIRSRNIP VLSEIEFAKR YTKAKTICIT GSNGKTTTTM
LTYHILKNAG LNVGLAGNIG HSFAAQVASA DFDWYVLEIS SFMLDDMYDF KADIAVLLNI
TPDHLDRYDY KLGNYAASKM RITQNQTSED IFIYCADDEE TLKALKNVKV DSKTYPFSIR
KKIEKGAYLE SNNIHININL NDQLTMSITE LALQGKHNIY NSMASGIVAK VLDIRNTAIR
ESMGDFKNIE HRLEHVARIS GVDYINDSKA TNVNSTWYAL ESVGTDVILI MGGVDKGNDY
DMLKDMVRQK VKAIVCLGKD NKRIHEAFED DVEIIVNTFS AHEAVQVAYH LAKKGNTVLL
SPACASFDLF KNYEDRGNQF KAAVKEL
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