| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3325 |
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| Symbol | murC |
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| ID | 8254444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3944622 |
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| End bp | 3945977 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936977 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_003093581 |
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| Protein GI | 255533209 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.148113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.545808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGA ATCATATACA GCGCGTTTAT TTTGTGGGAA TTGGTGGGAT TGGCATGAGT
GCCATTGCCA GGTATTTTGC AAAAAGAGGG TGTGTAGTTT GTGGTTACGA CAAAACACGT
ACAAATTTGA CTGTTGCTTT GGAACAGGAA GGCATTTTGG TGTCTTATCT TGATGATGCT
GCTGTATTGC CTGTGTGCTT TTTAGCAAAT AACAGCGATA CACTGATTGT TTATACACCA
GCAATACCAA AGAATTCCGA AATATTAAAT TACTTTAAAG ACAATGGTTT TATTTTAAAG
AAGCGTTCTG AGGTTTTAGG CATCATCAGT AAAGGACAGT TTTGTATAGC TGTGGCAGGT
ACACATGGAA AAACCACTAC TTCATCTATT GTAGCCCATG TTTTAATAGA TAGCGGATAT
GGATGTACAG CTTTTTTGGG TGGGATTGCC AGTAATTATA ACAGCAATTT TATTATTGGA
AACAATAACG TCGTTGTAGT TGAGGCCGAT GAATACGACC GTTCTTTCCT GACACTTCAC
CCTGATCTGG CTGTGATTAC TTCAATGGAT GCAGATCACC TGGATATTTA TGGCGATGCT
GCTCATCTGC ATGAATCTTT TGGTCTGTTT GCAAAGCAGT TAAAGCCACA GGGCACATTG
TTTGTGCGTA AGGGGCTTCC TTTGACAGCC GGGCTCAGTT ACAGTGTTGG ACAGGATTCA
CAGATTAAGG GACAAAACAT CAGGGTAGAA GGTTCGAAGT TTGTGTTTGA TTATGTTGAT
ACTGATCTGA GGATCAGCGA TATACAACTC ATGCTGCCAG GCAAACATAA TGTTGAGAAT
GCAGTAGCCG CAATTGCTGT AGCGCTTAAA CTGGGTATTG ACCACCATAA GATAAAAGCG
GCAATAGCTT CTTTTACAGG GGTTAAAAGA AGATTCGAAT ACATAGTGAA TACGCCGGAT
CACATTTATA TTGATGATTA TGCCCATCAT CCAGAAGAAT TAAGGGCTTG CTTTGATGCG
GTACGACAAT TGTATCCTGA TAAAAAGTTA ACGGTCATCT TTCAGCCGCA TCTTTTTACA
CGCACACGCG ACTTTGCAGC TGAATTTGCA AAAGTTTTAA GCACTGTAGA TGAACTGCTG
CTACTGGAAA TATATCCGGC CAGGGAATTG CCTTTACCAG GCATAAATTC GCAGTTTTTG
CTGGATAAGA TGTCCTTGAA AAGCAAGAGG ATATGTGGAA AAGATTTAGT AATAGAAGAG
ATAAAAAATA CAAAACCTGA ATTACTTTTA ACAGTAGGTG CAGGAGATAT AGACACATTG
ATACAACCAC TTAAAGCCAT TTTGAGAGAT GTTTAA
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| Protein sequence | MELNHIQRVY FVGIGGIGMS AIARYFAKRG CVVCGYDKTR TNLTVALEQE GILVSYLDDA
AVLPVCFLAN NSDTLIVYTP AIPKNSEILN YFKDNGFILK KRSEVLGIIS KGQFCIAVAG
THGKTTTSSI VAHVLIDSGY GCTAFLGGIA SNYNSNFIIG NNNVVVVEAD EYDRSFLTLH
PDLAVITSMD ADHLDIYGDA AHLHESFGLF AKQLKPQGTL FVRKGLPLTA GLSYSVGQDS
QIKGQNIRVE GSKFVFDYVD TDLRISDIQL MLPGKHNVEN AVAAIAVALK LGIDHHKIKA
AIASFTGVKR RFEYIVNTPD HIYIDDYAHH PEELRACFDA VRQLYPDKKL TVIFQPHLFT
RTRDFAAEFA KVLSTVDELL LLEIYPAREL PLPGINSQFL LDKMSLKSKR ICGKDLVIEE
IKNTKPELLL TVGAGDIDTL IQPLKAILRD V
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