| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3319 |
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| Symbol | |
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| ID | 8254438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3937756 |
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| End bp | 3938637 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936971 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003093575 |
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| Protein GI | 255533203 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.343226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT TTCACGGAAC GGGAGTAGCA TTGGTTACGC CTTTTAACGC AGATGGAACG
GTAGACTATG ATGGGCTAAA CAGGCTCATC AATCATTTAA TTGACGGAAA GGTAGAGTAT
CTGGTATCAT TAGGTACTAC AGGAGAAGCC TCAACTTTGA ATAAAGAAGA AAAGAAGAAG
ATATGGGAAT TTACTGCTGA AGTGAATAAC GGAAGGCTTC CCCTTGTTGC AGGGATAGGT
GGAAATGATA CCGCAGAAGT GATAAACAGT ATTAAAATCT TTGAAACAAA TGGCTATGAT
GCCATTTTAT CAGCCAGTCC ATATTACAAT AAACCTACCC AGGAAGGCAT ATATCAACAT
TATAAAGCAA TAAGTGAAAG CAGCCAGCTA CCTGTACTAT TGTATAACGT ACCAGGACGC
ACAGCCAGCA ATGTAAGTCC GGAAACGACA TGCAGACTGG CAGCAGACTG TAAAAATATC
ATTGGCACTA AAGAGGCTTC AGGTAGTTTT GATCAGTTTA ACCAGATCAT GCGCGACAAA
CCTGCTGATT TTTTATTGAT CTCCGGTGAT GATCCTGTAG CCATGCCTAT GATCTCGTTG
GGTGCTGTTG GTGTAATTTC TGTTATCGGA AATGCTTTGC CAAAACAGTT ATCCGACATG
ATCAGGCTAT CGCTTAAAGG TGATTACACT GCCGCATTAC CTAAGCATCT GGATTTAATT
GAATTTACAA GAATGATGTT TGCAGAAGGG AATCCGGCAG GTGTAAAAGC TGCATTAAAA
CAGTTGGGCG TGTGTGACGA TTATGTACGA CTGCCCCTGG TAGGGGTTTC TGATGGACTT
AGAAAAGCCA TTACAGCAGA AACAACCAGA ATTACAGCAT AA
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| Protein sequence | MNKFHGTGVA LVTPFNADGT VDYDGLNRLI NHLIDGKVEY LVSLGTTGEA STLNKEEKKK
IWEFTAEVNN GRLPLVAGIG GNDTAEVINS IKIFETNGYD AILSASPYYN KPTQEGIYQH
YKAISESSQL PVLLYNVPGR TASNVSPETT CRLAADCKNI IGTKEASGSF DQFNQIMRDK
PADFLLISGD DPVAMPMISL GAVGVISVIG NALPKQLSDM IRLSLKGDYT AALPKHLDLI
EFTRMMFAEG NPAGVKAALK QLGVCDDYVR LPLVGVSDGL RKAITAETTR ITA
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