Gene Phep_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3314 
Symbol 
ID8254433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3932585 
End bp3933037 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content41% 
IMG OID644936966 
ProductRES domain protein 
Protein accessionYP_003093570 
Protein GI255533198 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.294409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTTT ACCGTATTTC GCTTTGTAAA AGAGCTTTGG ATGTAAGTGG CACCGGAGCA 
AAATTATTTG GTGGCCGCTG GAACAGTGTA GGTATTCCGG TGTTGTACCT TGCCAGCAGC
AGGGCATTGG CTGCACTGGA AGTACTGGCC CATTTAACTA CAGTACAGGA CCCAGAAACT
TTTTGTGTTA CCATTTTTGA TGTTCCGGCA AGCAGTATTC AAACCATAGA AAAAGAGTTG
TTGCCTAAAA ACTGGAACAG TTACCCCTCC CCATCCTTAT TGAAAAAGCG GGGCGATGCT
TTTGCTAAGG CAAATGAGGC TTTGTTGTTA AAAGTTCCCT CTGCAATTGT AGAAGATGAA
TACAATTATA TTTTAAATGT TAACCATCCG CTCTCCCTCA AAGTTAAGAT CATCGATAGT
AAACCCTTTT TATTCGATAA ACGTTTACAC TAG
 
Protein sequence
MLLYRISLCK RALDVSGTGA KLFGGRWNSV GIPVLYLASS RALAALEVLA HLTTVQDPET 
FCVTIFDVPA SSIQTIEKEL LPKNWNSYPS PSLLKKRGDA FAKANEALLL KVPSAIVEDE
YNYILNVNHP LSLKVKIIDS KPFLFDKRLH