| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3302 |
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| Symbol | |
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| ID | 8254421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3912953 |
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| End bp | 3913489 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644936954 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003093558 |
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| Protein GI | 255533186 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.644129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGACGAAT TTATCATTCA GGAGTTAATA GCCGGTTGTA AGAAAAAAGA CAGGAAATCC
CAGAAAGGAC TTTACCAGCT TTTTTATAGT TATGCTATGC GAATGTGTAT CCGTTACGCA
AAAGATAAGG ATGAGGCTAT AGAACTTGTA AATGACGGGT TTATGCGGGT CTTTATTCAT
ATTCACCGTT ATGAGGAAAA GAGGTCATTT AAAGCCTGGT TAAGTACAAT TATGATCAAT
ACCTCTATAG ATCACTACAG GAAGCAAATA AAGCGTATTG AAATGGAAGA GCTAAATGCA
AGGCACGAAA TGGAGGATAA GGAGAGTATT CTTTCACATA TCCATTATGA AGAGCTGATT
AAACTGGTAC AAAGGCTATC TGTAGCCTAT CGGACAGTTT TTAACCTGTT TGCCATTGAT
GGATATACAC ACGAAGAGAT TTCATCTATG CTTTCTATTT CTGTGGGTAC TTCTAAATCA
AATTTATTTA AAGCAAGAGA ACAGTTAAAA AAGATGCTGA AACAACATCG CGATTAA
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| Protein sequence | MDEFIIQELI AGCKKKDRKS QKGLYQLFYS YAMRMCIRYA KDKDEAIELV NDGFMRVFIH
IHRYEEKRSF KAWLSTIMIN TSIDHYRKQI KRIEMEELNA RHEMEDKESI LSHIHYEELI
KLVQRLSVAY RTVFNLFAID GYTHEEISSM LSISVGTSKS NLFKAREQLK KMLKQHRD
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