Gene Phep_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3300 
Symbol 
ID8254419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3911234 
End bp3911794 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content38% 
IMG OID644936952 
ProductYceI family protein 
Protein accessionYP_003093556 
Protein GI255533184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.607855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGG CAATAAAAAT AACTAACTTT TTTTTTGGCA GTTTATTGTT GCTGTTACAG 
TTCAATGCTG CCGGGCAAAG CTATATAGGG AAAGATGTAA AAATCACGCT GTTTTCTACT
ACTCCTGTAG AAGACATCAG GGCTGTAAGT GTGAGGGGCA CTGCAGTACT GATAGCCAAA
ACCAGGGAAA TTGTGGTACA GGTTCCAATC AGGACATTTG AATTTGACAG GAGATTAATG
CAGGAGCATT TTAACGAAAA CTATATGGAA AGTGACCAAT ACCCACTTGC AAAATTTAAG
GGTACCATAG ATCAGGGTAT TGATTTCACC AAAGATGGGA CATATAGTGT TACTGTAAAT
GGTACACTTA GTATGCATGG GGTAGATAAG ATACGTGCTA TAACCGGGAA AGTGAGTATT
GAAAATGGAG AGATCAGGAT CTTAACCGCA TTTAAAGTAC CATGTGCTGA TCATAAAATA
AAAATACCAA CACTTATCAT GACCAAAGTT GCTGAAGTAA TCAGTATAAC CCTGGATGGT
AAGCTAAACC AGATCAAATA A
 
Protein sequence
MTWAIKITNF FFGSLLLLLQ FNAAGQSYIG KDVKITLFST TPVEDIRAVS VRGTAVLIAK 
TREIVVQVPI RTFEFDRRLM QEHFNENYME SDQYPLAKFK GTIDQGIDFT KDGTYSVTVN
GTLSMHGVDK IRAITGKVSI ENGEIRILTA FKVPCADHKI KIPTLIMTKV AEVISITLDG
KLNQIK