Gene Phep_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3297 
Symbol 
ID8254416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3909022 
End bp3909684 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID644936949 
Producthypothetical protein 
Protein accessionYP_003093553 
Protein GI255533181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.487466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAA AGCATTTAAA GGCCAGTAAA GTATTTTTAA TTACAGGGGT TTTACTTGGT 
TGGTTTGCTT TGTTGGCACA GTTGTACCTG ATTATTGTAA ATAATGCCAT CCCCTTGATG
GAATCTGTTG TACGGTATTT TAGTTTTTTT ACCATATTAA CCAATATCAT TGCAGCCCTT
TGTCTTAGCA AATTACTGTT AAGCTTTAAC AAAGAAGGTC ATGGTTTTTT GACCAGGCCA
GATACCCTGG CTGCGGTTAC TGTTTACATC AGTGTTGTGG GGATTGTTTA CAATCTGATC
CTGCGTTTTA CATGGCAGCC CCAGGGTTTA CAGTTTTTTG TTGACGAACT GCTTCACGCA
GTTATACCCA TCCTGTTTAT TGCCTACTGG CTGTTATTTG TCCCTAAAAA TACTTTAAAT
TGGTCTGCCA GCCTGCTCTG GCTCATCTAT CCCTTCTTGT ATTTGCTGTT CATCCTGCTA
CATGGCGCTT ATTCGGGGTT TTATCCTTAT CCTTTTATTG ACGTCAGTAA GCTGGGCTAC
AATAAAGTGC TGTTGAATAG CTTTTACCTG TTAATTGTGT TTCTTACGCT CTCGCTGTTG
CTGATAGGCA GTGGAAAGCT GATTCAAAAC CATAAGAAAA AGAATAAATA TCTACGTTAC
TGA
 
Protein sequence
MEGKHLKASK VFLITGVLLG WFALLAQLYL IIVNNAIPLM ESVVRYFSFF TILTNIIAAL 
CLSKLLLSFN KEGHGFLTRP DTLAAVTVYI SVVGIVYNLI LRFTWQPQGL QFFVDELLHA
VIPILFIAYW LLFVPKNTLN WSASLLWLIY PFLYLLFILL HGAYSGFYPY PFIDVSKLGY
NKVLLNSFYL LIVFLTLSLL LIGSGKLIQN HKKKNKYLRY