| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3295 |
|---|
| Symbol | |
|---|
| ID | 8254414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3907039 |
|---|
| End bp | 3908040 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644936947 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| Protein accession | YP_003093551 |
|---|
| Protein GI | 255533179 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.539867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TTGGAATTAA CGGCTTTGGC CGTATCGGCA GACTGGTTTT TAGGGCTGCT
TTAAAAAGAG GATTAGACAT AGTCGCAATT AATGACCTGG TTGAGCCTGA TTACATGGCT
TATATGTTAA AATACGATTC TACACATGGT CGTTTTGATG GAACAATTGC TGTTGAAAAC
GGACATCTTG TAGTGAATGG AAAAACGATA CGCATTACAG CAGAAAGAGA TCCCGCAAAT
TTGAAATGGA ATGAAGTGGG TGTGGAAACT GTAATCGAAT CTACCGGTTT ATTTTTAACC
CGTGCTGATG CTGAAAAACA TATCGCTGCC GGTGCGAAGA GAGTGGTATT CTCTGCTCCT
GCAAAGGACG CCGACATCCC TACTTATGTA ATGGGTGTAA ACCATCATAA ATTAACTGCT
GATCAAACTA TTGTTTCAAA CGCATCTTGT ACCACTAACT GTTTGGCACC TATTGCTAAG
GTATTAAATG ATAACTTCGG TATTGTTGAA GGCCTGATGA GCACAATTCA TGCGGTTACT
GCAACTCAAA AAACAGTAGA CGGTCCTTCT GCGAAAGACT GGAGAGGTGG CCGCGGTGGT
TTTTCTAACA TCATCCCTTC TTCAACTGGT GCTGCTAAAG CAGTAGGTAT GGTTTTACCG
GAACTAAAAG GTAAATTAAC CGGTATGTCG TTCCGCGTTC CTGTTGCTGA TGTTTCTGTG
GTAGATTTAA CTGCACGTTT AGAAAAACCA GCTACTTATG AGCAAATCAA AGCAGCTATG
AAAGCCGCTT CTGAAGGTGA ACTTAAGGGT GTTCTTGCTT ATACCGATGA AGAAGTTGTT
TCTTCTGATT TCATCGGAGA TGACCACGCT TCAATATTTG ATGCAAAAGC AGGTATTTCA
TTGAATGATA ACTTCGTAAA AGTAGTTTCA TGGTATGATA ACGAATGGGG CTATTCTTCT
GCATTAGCTA AATTCGTAGA GTACTACGGA AACTTAAAGT AA
|
|---|
| Protein sequence | MSKIGINGFG RIGRLVFRAA LKRGLDIVAI NDLVEPDYMA YMLKYDSTHG RFDGTIAVEN
GHLVVNGKTI RITAERDPAN LKWNEVGVET VIESTGLFLT RADAEKHIAA GAKRVVFSAP
AKDADIPTYV MGVNHHKLTA DQTIVSNASC TTNCLAPIAK VLNDNFGIVE GLMSTIHAVT
ATQKTVDGPS AKDWRGGRGG FSNIIPSSTG AAKAVGMVLP ELKGKLTGMS FRVPVADVSV
VDLTARLEKP ATYEQIKAAM KAASEGELKG VLAYTDEEVV SSDFIGDDHA SIFDAKAGIS
LNDNFVKVVS WYDNEWGYSS ALAKFVEYYG NLK
|
|---|
| |