Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3292 |
Symbol | |
ID | 8254411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3904392 |
End bp | 3905081 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936944 |
Product | NUDIX hydrolase |
Protein accession | YP_003093548 |
Protein GI | 255533176 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.238683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGAAG TCTTACCAAA ATTTAATTCC ACTTTCTCGA TTGATTGTGT GCTGTTCGGA TTTGACGAAG GAGAATTGAA AATTCTTTTA ATTGAAAGAA ACGAAGAACC TTTTAAGGAT TGGTGGGCCT TGCCGGGTAA CCTGGTTGAA GAAGATGAGA GTCTGGACCA GAGTGCCACC AGGATTCTGC ACGAGCTTAC TGGCCTTAGT GACATTTATA TGGAGCAATA TTATACCTTC GGCGATGTAA ACAGGCATCC CCAGGGTAGG GTTGTCAGTA TAGCTTACTA CGCATTGTTG AGGTTAGGTG GTGATAAGAT TGTAAAACCG ATCAGCAATT ATGCCAAACA GGCGTATTGG AGAAATGTAA AAGACTTGCC AAGGCTGGCC TTCGATCATC AGCAGATCTT TGAAAAAGGA ATGGAAAAGA TAAAAAGGAG GATTAAACAC CAACCCATAG CTTTCGAACT CCTGCCGGAA AAATTTACCC TTACCCAGCT CCAGAATGTT TATGAAGTGA TTCTGAACAA AAAGCTGGAT AAAAGGAACT TCCGGAAAAA GATGCTAAGT TTTGGTGTGC TGAGAGACCT CAACGAAAAG CAATATGGGG TGTCTTTCCG GGCTGCAACC CTCTATAAAT TTGATAAAAG AAAATACGCA AAGTTATTTG GCAAGGAAAT TTCATTTTAA
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Protein sequence | MKEVLPKFNS TFSIDCVLFG FDEGELKILL IERNEEPFKD WWALPGNLVE EDESLDQSAT RILHELTGLS DIYMEQYYTF GDVNRHPQGR VVSIAYYALL RLGGDKIVKP ISNYAKQAYW RNVKDLPRLA FDHQQIFEKG MEKIKRRIKH QPIAFELLPE KFTLTQLQNV YEVILNKKLD KRNFRKKMLS FGVLRDLNEK QYGVSFRAAT LYKFDKRKYA KLFGKEISF
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