Gene Phep_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3292 
Symbol 
ID8254411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3904392 
End bp3905081 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content41% 
IMG OID644936944 
ProductNUDIX hydrolase 
Protein accessionYP_003093548 
Protein GI255533176 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.238683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGAAG TCTTACCAAA ATTTAATTCC ACTTTCTCGA TTGATTGTGT GCTGTTCGGA 
TTTGACGAAG GAGAATTGAA AATTCTTTTA ATTGAAAGAA ACGAAGAACC TTTTAAGGAT
TGGTGGGCCT TGCCGGGTAA CCTGGTTGAA GAAGATGAGA GTCTGGACCA GAGTGCCACC
AGGATTCTGC ACGAGCTTAC TGGCCTTAGT GACATTTATA TGGAGCAATA TTATACCTTC
GGCGATGTAA ACAGGCATCC CCAGGGTAGG GTTGTCAGTA TAGCTTACTA CGCATTGTTG
AGGTTAGGTG GTGATAAGAT TGTAAAACCG ATCAGCAATT ATGCCAAACA GGCGTATTGG
AGAAATGTAA AAGACTTGCC AAGGCTGGCC TTCGATCATC AGCAGATCTT TGAAAAAGGA
ATGGAAAAGA TAAAAAGGAG GATTAAACAC CAACCCATAG CTTTCGAACT CCTGCCGGAA
AAATTTACCC TTACCCAGCT CCAGAATGTT TATGAAGTGA TTCTGAACAA AAAGCTGGAT
AAAAGGAACT TCCGGAAAAA GATGCTAAGT TTTGGTGTGC TGAGAGACCT CAACGAAAAG
CAATATGGGG TGTCTTTCCG GGCTGCAACC CTCTATAAAT TTGATAAAAG AAAATACGCA
AAGTTATTTG GCAAGGAAAT TTCATTTTAA
 
Protein sequence
MKEVLPKFNS TFSIDCVLFG FDEGELKILL IERNEEPFKD WWALPGNLVE EDESLDQSAT 
RILHELTGLS DIYMEQYYTF GDVNRHPQGR VVSIAYYALL RLGGDKIVKP ISNYAKQAYW
RNVKDLPRLA FDHQQIFEKG MEKIKRRIKH QPIAFELLPE KFTLTQLQNV YEVILNKKLD
KRNFRKKMLS FGVLRDLNEK QYGVSFRAAT LYKFDKRKYA KLFGKEISF