| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3281 |
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| Symbol | |
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| ID | 8254400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3893358 |
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| End bp | 3894488 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936933 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_003093537 |
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| Protein GI | 255533165 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.277548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAC AAACATTTGC AGAAAAAATT GCCAGAGCGC AGGATTTTCT TCCAATAAAT
GGAACGGATT ATATAGAATT TTATGTGGGC AATGCCAAAC AGGCTGCACA TTATTACAAA
ACGGCCTTTG GCTTCCAGTC GCTTGCCTAT GCAGGGCCTG AAACAGGTGT ACGCGACAGG
GCCTCGTATG TATTACAGCA GGGAAAGATC AGACTGGTGC TCACTACAGC TTTAAAATCG
GAGGGCCCGA TTGCGGAGCA TGTTAAACGG CACGGCGATG GCGTAAAAAT ACTGGCCCTT
TGGGTAGATG ATGCTTACAG TGCTTTTGAA GAGACCACCA AAAGGGGCGC AAGGCCTTAC
CTGGAGCCGG TAACCCACAC AGATGACCAT GGTGAGGTCC GTATGTCGGG CATCTACACC
TATGGCGAGA CCGTACATAT ATTTGTTGAA CGCAAAAATT ATAGGGGCAG CTTTATGCCA
GGGTATGTAG ACTGGAAAAG CAATTATAAC CCTGCAGATA CAGGTTTATT GTATATAGAC
CATTGCGTGG GCAATGTAGG CTGGAACAGG ATGAACGAAA CAGTGAAGTG GTATGAGGAT
GTGATGGGTT TCGTAAACAT CCTTTCTTTT GATGATAAAC AGATCAATAC GGAATATTCT
GCACTAATGA GCAAAGTGAT GAGCAATGGA AATGGGTATT CTAAGTTTCC GATCAATGAG
CCGGCTGAAG GGAAGAAGAA ATCGCAGATT GAAGAATATC TGGAATTTTA CGAAGGCGAA
GGGGTGCAAC ACATTGCTGT GGCAACAAAA GATATCCTGA CCACAGTAAG GGACTTAAAA
GCTCGAGGGG TTGAGTTTTT GAGTGCACCC CCTGAAGCCT ATTACAATAT GATGCCTGAA
CGTGTGGGCG AGATTGATGA AGAAATGGCA CAGCTAAAAG AACTGGGCAT TTTGGTAGAT
TGTGATGAGG AAGGTTATCT GCTGCAGATC TTTACCAAAC CTGTTGAAGA CAGACCGACC
TTATTTTTTG AGATTATACA GCGCAAAGGT GCACAATCTT TTGGGGCAGG GAATTTTAAA
GCCCTATTTG AGTCTTTAGA ACGCGAACAG GAACTAAGGG GGAATTTATA G
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| Protein sequence | MSTQTFAEKI ARAQDFLPIN GTDYIEFYVG NAKQAAHYYK TAFGFQSLAY AGPETGVRDR
ASYVLQQGKI RLVLTTALKS EGPIAEHVKR HGDGVKILAL WVDDAYSAFE ETTKRGARPY
LEPVTHTDDH GEVRMSGIYT YGETVHIFVE RKNYRGSFMP GYVDWKSNYN PADTGLLYID
HCVGNVGWNR MNETVKWYED VMGFVNILSF DDKQINTEYS ALMSKVMSNG NGYSKFPINE
PAEGKKKSQI EEYLEFYEGE GVQHIAVATK DILTTVRDLK ARGVEFLSAP PEAYYNMMPE
RVGEIDEEMA QLKELGILVD CDEEGYLLQI FTKPVEDRPT LFFEIIQRKG AQSFGAGNFK
ALFESLEREQ ELRGNL
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