| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3280 |
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| Symbol | |
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| ID | 8254399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3892129 |
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| End bp | 3893286 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936932 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_003093536 |
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| Protein GI | 255533164 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.524985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATCT ATCATACATT AGGGACTATC CCTGCCAAAC GTCATACTGT TTTCCGTAAG
CCCGATGGGA ACCTTTACGC TGAAGAACTT GTTTCTACAG AGGGCTTTTC CAGTTTATAC
TCGCTGGTGT ACCATTGCCA CCCTCCTACC ATTGTTAAAG CCTTAGGGGA ACCTTATTCA
GTTGAACCTA AAATTGCCAG GGAGAAACAT TTGAAACATA CCAGTCTGCT TGGCTTTAAC
ATTAAACCGG AAGATGATTA CCTGAAGAGC CGCAAGCCTG TACTGGTAAA CAGCGATCTG
CACATTTCGC TGGCTGCACC GAAAAAATCC ATGACGGATT ATTTTTATAA GAACAGCCAG
GCCGATGAAG TCATATTTAT CCATGAAGGT ACGGGGACAT TAAAGACAGG TTTTGGCAAA
ATCCGCTTTG GCTATGGCGA TTACGTGATT GTACCCAGGG GCACCATTTA CCAAATTGAA
TTTGATGATG AAAAAAACAG GTTATTTATT GTAGAGAGTT TTAGCCCGAT CCGTTCGCCC
AAGCGCTACC GCAATGAATA CGGACAGCTG ATGGAGCATT CTCCTTATTG CGAGCGTGAC
ATCAGACGGC CATCTGATCT GGAAACCATA GATGCTTATG GCGATTTTAA GGTGTTGATA
AAAAAACAGG GCCTGATTTA TCCTTATATA TACGGTACAC ATCCTTTTGA TTTTGTGGGT
TGGGATGGCT TTCATTATCC TTATGCCTTT TCTATTCATG ATTTTGAACC GATCACAGGA
AGGTTGCATC AGCCTCCCCC TGTGCACCAG ACTTTTGAAG GACACAATTT TGTGATCTGT
TCTTTTGTTC CCCGCAAATA CGATTATCAT CCTTTATCGA TACCAGCCCC CTATAACCAT
AGTAATGTAG ACAGTGATGA GGTGCTGTAT TATGTGGACG GTGATTTTAT GAGCAGGAAA
AGTGTGGTAA AAGGACAGAT TACGCTGCAT CCGGGAGGTA TTCCCCATGG GCCGCACCCG
GGCACAGTTG AGAAATCAAT AGGCAAGGAA AGTACGGAGG AACTGGCTGT GATGATAGAT
CCCTTCAGGC CCCTGATGCT GACAGAAGAT GCGTTGGCAA TAGAGGATGA GGATTACCAC
AAAAGCTGGC TGGAGTAA
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| Protein sequence | MPIYHTLGTI PAKRHTVFRK PDGNLYAEEL VSTEGFSSLY SLVYHCHPPT IVKALGEPYS
VEPKIAREKH LKHTSLLGFN IKPEDDYLKS RKPVLVNSDL HISLAAPKKS MTDYFYKNSQ
ADEVIFIHEG TGTLKTGFGK IRFGYGDYVI VPRGTIYQIE FDDEKNRLFI VESFSPIRSP
KRYRNEYGQL MEHSPYCERD IRRPSDLETI DAYGDFKVLI KKQGLIYPYI YGTHPFDFVG
WDGFHYPYAF SIHDFEPITG RLHQPPPVHQ TFEGHNFVIC SFVPRKYDYH PLSIPAPYNH
SNVDSDEVLY YVDGDFMSRK SVVKGQITLH PGGIPHGPHP GTVEKSIGKE STEELAVMID
PFRPLMLTED ALAIEDEDYH KSWLE
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