| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3275 |
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| Symbol | |
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| ID | 8254394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3887865 |
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| End bp | 3888410 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936928 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003093532 |
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| Protein GI | 255533160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.459641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.880258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGAT ACCTGATTGT ATTTAGTTTT CTTTTGTTAA GTTTCTCTGC GGCAAAGTCG
CAGACCACCG TGCCTTTACA ATACCAGGAA CTGGTGAAAA ACCTGATGAA ACAGAGCACT
GCAAATCCCA TTTCCAATAC GCAAAAAATG GAATCTCCCA ACCGTTTGCT GGAATTTGCC
AAATCTATGC TGGGCATCAG GTACAGGGCT GCCTCAAGCA ATCCCAACAG GGGTTTCGAC
TGTTCGGGCT TTGTAAACTA TGTGTTCAGT AATTTTGGGT TTAAAGTACC ACGTTCATCC
AGGGATTTCG CAACAAGTGG TGAGGCTAAA AAGCTGGAAG ATGCCAGAAT TGGGGATGTA
ATTGTATTTA CAGGTACCAA CAGCCGTTCA AGAACGCCTG GACATGTAGG CATTATCTAT
GCCATAGATG GTGATCAGGT TAAGTTTATC CATTCTTCAT CAGGAGGTGC CAAAGGCGTT
ACCATTTCCA GTCTGGATGA AGGTTTTTAC AAAAAACGCT TCTTAAAGGT CATCAGTATT
CTTTAG
|
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| Protein sequence | MKRYLIVFSF LLLSFSAAKS QTTVPLQYQE LVKNLMKQST ANPISNTQKM ESPNRLLEFA
KSMLGIRYRA ASSNPNRGFD CSGFVNYVFS NFGFKVPRSS RDFATSGEAK KLEDARIGDV
IVFTGTNSRS RTPGHVGIIY AIDGDQVKFI HSSSGGAKGV TISSLDEGFY KKRFLKVISI
L
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