| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3271 |
|---|
| Symbol | |
|---|
| ID | 8254390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3882807 |
|---|
| End bp | 3884735 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644936924 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003093528 |
|---|
| Protein GI | 255533156 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.269035 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAGAG AAAATCCAAT AACCTTAAAC CTGTATGTGG CCCTGGCCTA CAGGTTCCTG
ATTTTACTGG TTTTATATAC TTTATGCAGA TTGGGCTTCT TCTTTTTTAA CCATAGCCTG
TTCCAGCACA TTACCTTACC CAAATACCTG TACATGCTAT GGGGCGGACT AAAGTTTGAC
GTTTCGGCAC TCATCTATAT CAATGCCATC TTCCTTTTAA TGCAGCTGGT ACCTGCCCCT
TTTAAGTACA AAGATGGCTA TCAGCGCTTT TGCAAATGGC TTTTTATCAT TAGCAACAGC
ATTGGCATTA TGGCCAACTT TGCCGATTTT GCCTACTATA AATATACACT TAAAAGAACT
ACAGCAACTG TTTTTAGCCA GTTTAGCCAT GAACAGAACA AGTTTAAACT GTTTATAGAT
TTTTTAACAG ATTACTGGTA CCTGTTTCTG CTTTATGCCC TGTTTATATG GGGCTTTGTA
AAGCTTTACC AGCTGGTAGG TGTTAAAAAA GTAAAAACTT TTAAATGGCC TGCATACCTG
TTGCAAACCG TATTGCTGTT TGCTATTGCA CTGGTTTGCC TTACAGGTGT ACGTGGTGGC
TGGGGCTATG GCACCAGGCC CATTACGCTG AGCAATGCAG GAGAATTTGT GGATACACCA
GATCAGATGA GCCTGGTGCT GAACACACCT TTCTGTATAT TCAGGACTTT AAAAGTGTCT
AAACTAAAGC CTGTAAACTA TTACGATGAG CAGACATTGA ACAGCATTTA CAATCCCATA
CACCTGCCCA AAGATACGGT TGCCTTTAAA AAGCTGAATG TCGTTTTCCT GATCATAGAA
AGTTTGGGTA AGGAACATAT AGGCGGCTTA AATAAAGACC TGATGGGTGG AAAGTACAAA
GGTTTTACCC CTTTTATTGA TTCGCTGATT GAACAGAGCT ATACCTTTAC CCATACTTAT
GCCAATGGCC GTAAATCTAT AGATGCGCTA CCTTCTGTGA TTTCAGGTAT TCCTTCTATC
CGTGAGCCTT TTGTACTTTC GGTATACTCA GGGAATAAGA CCACCAGCAT TGCCAAGCTT
TTAGGTGATA AGGGGTATGA AACTGCCTTT TTTCATGGGG CACCAAATGG TTCGATGGGT
TTTTCCTCTT ATACCCATCT TGCAGGAATC AAACATTATT TCGGACAGAA CGAATATAAA
AAAACAGGAG ATTATGACGG TACCTGGGGC ATTTGGGACA ATCCTTTTAT GCAATATATG
GCCCAAACCA TGAATACGCT GAAGCAACCT TTTTTCTCAG CATTTTTCTC GCTTTCTTCT
CATCATCCTT TCAAGCTGCC CGATGAATAT GCAGGTAAAT TCCCTAAAGG TCATTTGCCT
GTACAGGAAG TACTGGGCTA TACAGACATG GCACTGCGTA ATTTTTTCAG AACGGCATCT
GCTATGCCCT GGTATAAAAA CACACTGTTT GTATTGTGTG CGGATCATGC CACAGTATCT
TACTTCCCTG AATATCAAAC CACTCCCGGA TATTTTTCTA TTCCGATTGT TTTTTATTAT
CCTGGCGGGG ATTTAAAAGG GAAAGCGGAT AAAAACGTAC AACAGATAGA TATTATGCCC
ACTGTTTTGA ATTATCTGCA TTATGACAAA CCTTATTTTG CGCTTGGCTT TGATGCTTTT
GACAAAAGAC AGGATAATTT TGTGGTAAAC AATAACGATG GTACCTTTAG CTTTTACCAG
GGCGATTATT TACTGATCAA TGATGGCAAG ATCAACCTTT CATTATACAA TTTAAAAACC
GACCGTCTTA CTCAAAACAA CATATTAGAT AAAGAACCGT TAATTGCACA ACAAATGGAA
AAATACCTGA AAGCTTTTGT GCAACAGTAC AACAACCGGA TGATTGAAAA CAAATTAACG
GCGAATTAG
|
|---|
| Protein sequence | MKRENPITLN LYVALAYRFL ILLVLYTLCR LGFFFFNHSL FQHITLPKYL YMLWGGLKFD
VSALIYINAI FLLMQLVPAP FKYKDGYQRF CKWLFIISNS IGIMANFADF AYYKYTLKRT
TATVFSQFSH EQNKFKLFID FLTDYWYLFL LYALFIWGFV KLYQLVGVKK VKTFKWPAYL
LQTVLLFAIA LVCLTGVRGG WGYGTRPITL SNAGEFVDTP DQMSLVLNTP FCIFRTLKVS
KLKPVNYYDE QTLNSIYNPI HLPKDTVAFK KLNVVFLIIE SLGKEHIGGL NKDLMGGKYK
GFTPFIDSLI EQSYTFTHTY ANGRKSIDAL PSVISGIPSI REPFVLSVYS GNKTTSIAKL
LGDKGYETAF FHGAPNGSMG FSSYTHLAGI KHYFGQNEYK KTGDYDGTWG IWDNPFMQYM
AQTMNTLKQP FFSAFFSLSS HHPFKLPDEY AGKFPKGHLP VQEVLGYTDM ALRNFFRTAS
AMPWYKNTLF VLCADHATVS YFPEYQTTPG YFSIPIVFYY PGGDLKGKAD KNVQQIDIMP
TVLNYLHYDK PYFALGFDAF DKRQDNFVVN NNDGTFSFYQ GDYLLINDGK INLSLYNLKT
DRLTQNNILD KEPLIAQQME KYLKAFVQQY NNRMIENKLT AN
|
|---|
| |