| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3270 |
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| Symbol | |
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| ID | 8254389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3882031 |
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| End bp | 3882717 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936923 |
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| Product | allergen V5/TPX-1 family protein |
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| Protein accession | YP_003093527 |
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| Protein GI | 255533155 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.119543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTTT TATCAATTGT CCTTATCTCA TTTTTTTCCG TATTCATTCC TGTTTCCATA
AAAGCCCAGC GCGCTGATGC CTGGACCAAG GACGAATTAA AAATGGCCAA TACTGCCGGA
AATGCACCTT ACCTAAGCGG CGAAGAAAAA GACATCGTCA TTTACATGAA CCTGGTACGC
ATGGATGGTG AACGTTTTTT TAATACTTTT TTACAGGACT TTATTGATGA TTATAATGAA
CAAATGAAAC AGTACAGCAA TTATGAAAGG TTAAAGGTTA ACAGGAACGA CAGTTATTAC
AAAAGTTTAA AGAACGACCT GAAGAACATT AAGCTACTAC CTGCCTTTTG GCCGGATGAA
GCCCTGAGCT GGGTGGCAAA ACAGCACGCC AGGGATTTAA ACAAGAACAA TTTTGCTGCA
CACAACTCTA GTGATGGCCG GACAATGAAA GACAGGATCG GTAAAATGTA CCCTAAAAAA
TCAAATGGCG AAAACCTGGC CTTTGGTTTT TCGACCGGAC TGGGCAATGT TTGCATGTTG
CTGTTAGATA AGGGCGTACC CGACCTGGGG CACAGAAAAC TGATTTTGAA TACCTCCTAT
CAGTTAAATA CAATTGGGGT AAGCATACAA CCACATAAAA CTTATCGTTA TTGTGCAGTG
ATTGATTTTG TATCCCTACC CCATTAA
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| Protein sequence | MKFLSIVLIS FFSVFIPVSI KAQRADAWTK DELKMANTAG NAPYLSGEEK DIVIYMNLVR
MDGERFFNTF LQDFIDDYNE QMKQYSNYER LKVNRNDSYY KSLKNDLKNI KLLPAFWPDE
ALSWVAKQHA RDLNKNNFAA HNSSDGRTMK DRIGKMYPKK SNGENLAFGF STGLGNVCML
LLDKGVPDLG HRKLILNTSY QLNTIGVSIQ PHKTYRYCAV IDFVSLPH
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