Gene Phep_3267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3267 
Symbol 
ID8254386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3879553 
End bp3880662 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content41% 
IMG OID644936920 
Producthypothetical protein 
Protein accessionYP_003093524 
Protein GI255533152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.204979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0328841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC GCTATCTCTA TCTGTTGCTT TTTCTTCCTT TTTTAACAAA TGCCCAGGGC 
ATAAATGTCG CCCTTTCTGA AAAGAGTAAG ATCAATTTCT CGGGCATGCT GCAAACACAG
TTTAATTATT CACTCGATGA CGATGTAGAC ATTACCGGAA GGCACCATAC CGGTACGGAG
CATTTTTCAC ACAACTCCTT TTCTGTAAAA AGGGCCAGAC TGCAGCTGAG TGCGGCAATC
AATGATCGTA TCAATGCGGT TATGCTGGTC AATTTTGGCG ACTTTATAGG AAATCCACAA
AACAAAGTAC TCGAAAATGC CTATATAAAG TATAGCGTAA ATGACTATGT AAATTTTCAG
TTCGGACAGT TCAGGCCACA GTTTGGGCAG GAAGACAATT ATCCGGTTGA TTTTGTCCGC
TCCATAGATT ATTCCAACCA GTATTATCTT TTTGGGTCAA ACAGCTGGCA GAGTTTCCAG
ATCGGTGCCA GCTATTTTGG AGAGATCAAA AATAGCAGTA TCCCCTTAAA GTATTATATA
GGTGTTTATA ATGGCAATAA CAGAAACCAG ACCGGCGACA ATGACGATGG AAAGATTGTT
CCGGCACGTC TCGTATTTGG GCTTGGTAAA AGTACCTTCC TGGGTTTAAG TGCTGGTGCA
GGTAAAAATA TGGGACAGAA AATATGGGCT TATGGTGCCG ATATCGACTA CAAAAAGCAA
TTGAATGAAA GGTGGAATGT GGAATTTGTT TCGGAATATA AACAGGGGAT CAACAGTGTT
GCCTATTTTG ATCAGACAGA TCCGGTTATT CCTGTCAGCC ACTTTGCCAT GCGGGGCATT
TATCTGCAAC CTAATGTTGG GTATGGTTTT AAAAATACAA GACTTAAAAG CCTGGAGTTT
GCTTTAAGGT ACGAATATCT GGATGCTGAT TTTAAACAGA ACGGTAATGC AAGGCAAAGC
TATATTCCTA TGGTCAGTGC TTCTTTTGCA GAAGCTTATG CCATCCGTGT GCAAATGGGT
CTGCTGATGG ACCGTTATGA AAATAATATT CCCAATACTA CGCAATACAA TACCAACAGA
ATTATATGCC AGGTGCAGGC CCGGTTTTAA
 
Protein sequence
MKQRYLYLLL FLPFLTNAQG INVALSEKSK INFSGMLQTQ FNYSLDDDVD ITGRHHTGTE 
HFSHNSFSVK RARLQLSAAI NDRINAVMLV NFGDFIGNPQ NKVLENAYIK YSVNDYVNFQ
FGQFRPQFGQ EDNYPVDFVR SIDYSNQYYL FGSNSWQSFQ IGASYFGEIK NSSIPLKYYI
GVYNGNNRNQ TGDNDDGKIV PARLVFGLGK STFLGLSAGA GKNMGQKIWA YGADIDYKKQ
LNERWNVEFV SEYKQGINSV AYFDQTDPVI PVSHFAMRGI YLQPNVGYGF KNTRLKSLEF
ALRYEYLDAD FKQNGNARQS YIPMVSASFA EAYAIRVQMG LLMDRYENNI PNTTQYNTNR
IICQVQARF