| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3264 |
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| Symbol | sdhA |
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| ID | 8254383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3875491 |
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| End bp | 3877407 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644936917 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003093521 |
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| Protein GI | 255533149 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000706874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0228464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA ATGCTAAAAT ACCACCGGGG CCATTAAAGG ATAAATGGAG TTTTTATAAA
GACCATGCGA AGCTGGTAAA CCCGGCCAAC CGGAAAAAAC TGGATGTGAT AGTGGTAGGT
ACCGGACTTG CCGGTAGTGC GGCGGCGGCA TCGCTGGCAG AGATGGGGTA TAACATCACT
TCTTTCTGTT TTCAGGATTC GGCCAGAAGG GCACATTCTG TGGCCGCACA AGGTGGGGTA
AACGCAGCCA AGAACTATAA GAACGATGGC GACAGTACCT ACCGCATGTT TTACGATACG
ATTAAAGGTG GCGATTTCAG GTCCAGGGAA GCAAATGTAT ACCGTCTGGC AGAATGCTCG
GCACAGCTGA TTGACCAGGC AGTAGCACAG GGCGTGCCTT TTGGCCGGGA GTATGGAGGC
TATTTAAATA ACCGTTCTTT TGGAGGGGTA CAGGTAAGCC GTACCTTTTA CGCCAGGGGA
CAAACGGGGC AACAACTGTT GCTGGGGGCT TATCAGGCGC TGATGCGGCA GGTGGCTGCC
AAAAATGTGA AACTGCATAC CCGTCATGAA ATGATGGAAT TGGTTGTGGT AGCGGGCAAG
GCCAGGGGGG TAATTGTACG AAACCTGGAT ACCGGTGAAA TAGAAAGACA TACGGCCCAT
GCCGTAATTC TGGCTACAGG GGGCTTTGGA AAGATCTATT ACCTGTCTAC CCTGGCTATG
GGCTGCAATG CATCTGCCAT CTGGCGGGCG CATAAAAAAG GAGCTTTTAT GGCCTGTCCA
AGCTGGACCC AGGTACATCC AACCTCTCTG CCGCAATCGG GCAGTTACCA GAGTAAACTT
ACGCTGATGT CAGAATCGCT AAGGAACGAC GGACGCATCT GGGTGCCATT AAAAACAGAA
GAAAGCAGAA ACCCAAATGA TATCCCTGAG GAAGAACGTG ACTATTACCT GGAACGGCGC
TATCCGGCAT TCGGGAACCT GGCACCCCGC GACATTTCTT CACGTGCAGC CAAAGAACGT
ATAGATGCCG GTTTTGGGGT AGGGCCGCAA AAGAATGCTG TGTACCTCGA TTTTTCTAAG
GCAATAAGGG AGCAGGGGAA ACAAAAGATC AAAGAGAAAT ATGGCAACCT GTTTGATATG
TACCGTAAAA TTACGGCTAC CGATGCGTAT ACGGAACCAA TGATGATCTC GCCGGCAGCA
CATTTCTCTA TGGGCGGCCT ATGGGTAGAT TATGAACTGA TGACCACTAT ACCTGGCCTG
TTTGCATTGG GGGAAGCCAA TTTTGCGGAC CATGGGGCCA ACCGCCTGGG GGCAAATTCT
TTGCTGCAGG CTTGTGTTGA TGGATATTTT GTGGCACCCT ACACGGTATC CAATTATCTT
TCCGGAGAAA TTAAGGTACC GCGTCTTGAC CTGAACAGGC AGGAATTTGT AGATGCAGAG
GTGGAGGTAA GGGCACATTT ATCCCGGTTA CTGGAAATTA AAGGCGATAA AACGGCAGAT
CACTACCATA AAATTCTGGG CAAGCTGCTA TATGATTATT GCGGCCTGTC GCGGAGCCGG
GAAGGTTTGT TAAAAGCAAT TCATGACATC CGCAAATTGC GGGATGATTT TTACCACAAT
CTGAAGGTAT CTGGTGAGGA GGATGAGATG AATGCTGAAC TGGAAAAGGC GGGGAGGGTG
AGTGACTATC TGGAAATTGC AGAACTGATG TGCTATGATG CACTGACCAG GGAGGAATCC
TGCGGAGCAC ATTTCAGGGA AGAATACCAG AGCCCCGAAG GAGAAGCTTT AAGGAACGAT
GAACAGTTTT GTTTTGTATC TGCCTGGCAA TATAGGGGTG AAGGCCAGGA AGAATTGCTG
GTTCCTGAAC CCTTAAAATT TGAAAATGTT GAACTGGCCG TAAGAAGTTA CAAATAA
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| Protein sequence | MELNAKIPPG PLKDKWSFYK DHAKLVNPAN RKKLDVIVVG TGLAGSAAAA SLAEMGYNIT
SFCFQDSARR AHSVAAQGGV NAAKNYKNDG DSTYRMFYDT IKGGDFRSRE ANVYRLAECS
AQLIDQAVAQ GVPFGREYGG YLNNRSFGGV QVSRTFYARG QTGQQLLLGA YQALMRQVAA
KNVKLHTRHE MMELVVVAGK ARGVIVRNLD TGEIERHTAH AVILATGGFG KIYYLSTLAM
GCNASAIWRA HKKGAFMACP SWTQVHPTSL PQSGSYQSKL TLMSESLRND GRIWVPLKTE
ESRNPNDIPE EERDYYLERR YPAFGNLAPR DISSRAAKER IDAGFGVGPQ KNAVYLDFSK
AIREQGKQKI KEKYGNLFDM YRKITATDAY TEPMMISPAA HFSMGGLWVD YELMTTIPGL
FALGEANFAD HGANRLGANS LLQACVDGYF VAPYTVSNYL SGEIKVPRLD LNRQEFVDAE
VEVRAHLSRL LEIKGDKTAD HYHKILGKLL YDYCGLSRSR EGLLKAIHDI RKLRDDFYHN
LKVSGEEDEM NAELEKAGRV SDYLEIAELM CYDALTREES CGAHFREEYQ SPEGEALRND
EQFCFVSAWQ YRGEGQEELL VPEPLKFENV ELAVRSYK
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