Gene Phep_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3262 
Symbol 
ID8254381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3874187 
End bp3874678 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID644936915 
ProductAnkyrin 
Protein accessionYP_003093519 
Protein GI255533147 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00689099 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0238683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCACA TCATATCGGC TTTAATTCAT GCTTCAAGGA CAGGTGATTT ACTATTATTG 
CAGGAAATAA TAGACCTGAA CACCAACCTT GAACTGAGAG ATGATAAAGG TTATACACCT
TTAATCATCG CTTGTTACAA TCATCAAACG GAAGCAGCCA GGCTACTCCT TCGATCAGGG
GCAGATGTTA ACGGCATAGA TACTGGCGGC AATACCGCAC TTATGGGGGT TTGTTTTAAA
GGCTATGCAG ATATTGCGGA GTTGCTTATT GCTCATCAGG CTAATGTAAA TCTGTTGAAT
GGAAATGGCG GGACTGCTTT AATGTTTGCT GTAATGTTTG GGCGCAATGA ACTGATTGCA
TTGCTCCTTC AACATGGTGC AGACCTGACG ATAAAAGACA ATCGGGGAAT GGATGTATTG
GACATTGCCG TACAACAAGG TAATGAACAG GGACTTCAAC TTTTAAAACA ACATCAACCT
ATAAATCAGT AA
 
Protein sequence
MDHIISALIH ASRTGDLLLL QEIIDLNTNL ELRDDKGYTP LIIACYNHQT EAARLLLRSG 
ADVNGIDTGG NTALMGVCFK GYADIAELLI AHQANVNLLN GNGGTALMFA VMFGRNELIA
LLLQHGADLT IKDNRGMDVL DIAVQQGNEQ GLQLLKQHQP INQ