Gene Phep_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3252 
Symbol 
ID8254371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3857504 
End bp3859573 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content40% 
IMG OID644936905 
ProductSialate O-acetylesterase 
Protein accessionYP_003093509 
Protein GI255533137 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00656334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGAATA AGAAATCTGC CCTGCTTCTT GTTTTTCTGT TACAATTTGG ATTCAGCTCC 
TTTGGCCAAT CTATAAAAGT AGCATGTATC GGAAATTCAG TTACGTTCGG AGCCGGTTTA
GTCAATCCCG AAAAAGAATC CTATCCGTCA GTTTTGCAAG GGTTACTGGG GCCGGAATAC
CATGTGAAAA ATTTTGGATT AAGCGGAGCT ACACTTTTGA AAAAAGGTCA CAGACCTTAT
TGTAAAACCA GGCAATTTGA AGATGCTGTA TCATTTAAAC CTGACGTTGC CATCGTGCAT
CTTGGGTTAA ATGATACAGA TCCACGAAAT TGGCCTGATT TTAAAGATGA CTTTGAACCC
GATTACGCAT GGTTGCTGGA TACACTTAAA AAGCAGAACC CTAATGTCAA ACTTTATGTG
TGCAGGCTTA CGCCGATATT TAATGGGCAT CCCAGATTTA AATCAGGCAC AAGAGATTGG
TATTGGCAAA TTCAAGAACG AATTGTTGCT ATTGCCAAAG TAAATAACGC AAGGTTAATT
GATCTGACAT CACCATTATA TAACAGGCCT GATCTGTTTG CAGATAATTT GCATCCTGAT
AAGGAAGGTG CAGCTATTAT TGCACAAACT GTGTATGAAG ATCTTACCGG TAATTACGGC
GGGCTTAAAC TTCCTGAAAT TTTTACAGAC CATATGGTGT TTCAGCGCAA TAAGCCTGTA
AAGATATATG GTATAGCAAA TGCTGATGAT AAAGTTACAG TTGTATTTAA TCATAAAAGC
CTTATTGCAA TTCCGGATAG CCGTGGCAAA TGGAAAGTTG AATTTCCTGC TATGCAACAT
GGGGGGCCTT ACACGTTAAA CCTAAAGGCA GGTAGTAAAA CCATTTCTTT AACTGATATT
CTTATTGGTG ATGTTTGGTT ATGCTCAGGG CAGTCAAACA TGGCTTTTAC CCTAAGTGCA
TCAGAAACAG GTAAGTCAGA ATTGGCAGAC ATTAAACCGA ACAATATGAG GTTGTTTAAG
TTTACACAGT ATGCAGAAAC AAACAATGCT CCATGGGATA ATAAAACTTT AGAACAAGTA
AATCGGCTTA AATATTTCTC AGGAAATTGG ACGCCAACTA ATGCAGGAAC TGCTGCAGAA
TTTTCTGCTG TCGGATACTA CTTTGGTAAA AAATTGACTG CCGAATCCGG TGTGCCTGTT
GGCTTAATCC AGTTGGCAGT GGGCGGCTCA ACAATTGAGT CATGGATTGA CAGGTATACG
ATGGAGCATG ATGAGCAGCT GGTTGATGTG CTCGCCGATT GGCGCAAGTC TGATTTTATA
CAGGAATGGG CAAGAGGCAG GGCGGACGTT AATCTTAAAC AAGCAACCAA TCCTAAACAA
CGCCATCCTT ACGAACCGGT GTATAACTAT GAGGCCGGCA TATCCAAGCT AATTGAATTT
CCAATAAGTG GAGTCATATG GTACCAGGGT GAAAGCAATG TGCAAAATGT AGATCTATAT
AAACACACAT TCCCTGTGTT GGTACAAAGC TGGCGGCAAA AGTGGGGCTA TGATTTTCCG
TTCTATTTTG TGCAGTTATC TGGTCTTAAC AGACCTTCAT GGCCTTATTT TAGAGATGCA
CAACGTGAAC TTCAAAAAGC AATTAAAAAT ATCTGGATGG CTGTGAGCTC TGATCTTGGT
GACTCATTGA ATGTACATCC CAAAAGGAAA AAAGAAGTAG GAGACCGGCT GGCATTGTTG
GCCTTAAAGC ATACCTATCA CAAAAATATA ACAGCTGAAG GACCAAAAGC GCTAAGGGCA
ACCATTAAAG GAAATGAGGT AGTGATTTCT TTTGATTCAG CTAAACTCTT TACCGCAAAT
CAACAGGATC CGGAAGGGTT TGAACTGGTA ACAGACCAAG GCATTCATAT TAAATCAAAG
GGACGGATCG TGAATGACAA AATGATCATT CCCATTCCTC CAAATAAAAA AATTAAAGGT
GTGGTGTATG GCTGGCAGCC CTTTACCCAC GCTAATCTCG TAAACGAAGT AAACCTGCCT
GCATCTACTT TTTCACTAGC GATACTTTAA
 
Protein sequence
MWNKKSALLL VFLLQFGFSS FGQSIKVACI GNSVTFGAGL VNPEKESYPS VLQGLLGPEY 
HVKNFGLSGA TLLKKGHRPY CKTRQFEDAV SFKPDVAIVH LGLNDTDPRN WPDFKDDFEP
DYAWLLDTLK KQNPNVKLYV CRLTPIFNGH PRFKSGTRDW YWQIQERIVA IAKVNNARLI
DLTSPLYNRP DLFADNLHPD KEGAAIIAQT VYEDLTGNYG GLKLPEIFTD HMVFQRNKPV
KIYGIANADD KVTVVFNHKS LIAIPDSRGK WKVEFPAMQH GGPYTLNLKA GSKTISLTDI
LIGDVWLCSG QSNMAFTLSA SETGKSELAD IKPNNMRLFK FTQYAETNNA PWDNKTLEQV
NRLKYFSGNW TPTNAGTAAE FSAVGYYFGK KLTAESGVPV GLIQLAVGGS TIESWIDRYT
MEHDEQLVDV LADWRKSDFI QEWARGRADV NLKQATNPKQ RHPYEPVYNY EAGISKLIEF
PISGVIWYQG ESNVQNVDLY KHTFPVLVQS WRQKWGYDFP FYFVQLSGLN RPSWPYFRDA
QRELQKAIKN IWMAVSSDLG DSLNVHPKRK KEVGDRLALL ALKHTYHKNI TAEGPKALRA
TIKGNEVVIS FDSAKLFTAN QQDPEGFELV TDQGIHIKSK GRIVNDKMII PIPPNKKIKG
VVYGWQPFTH ANLVNEVNLP ASTFSLAIL