Gene Phep_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3247 
Symbol 
ID8254366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3851328 
End bp3851843 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content40% 
IMG OID644936900 
Producthypothetical protein 
Protein accessionYP_003093504 
Protein GI255533132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0223876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TATTACTACT AACAGCAGTT GCAGGTTTAT TTGCATTTTC TAGTGTAAAT 
GCACAAACTA AAGCCCCTAA ATTAAGTGTA GGTGCTGAAT TCGCTTTCCC AATGGGTGAT
TTTGGTGATT CATACAATTT TGGTTATGGA GGTTCATTGC AATATCAGCA CCCTGTTGCT
GCGAATCTAT TGGTAACTGG TAGTGCAGGT TTTACTAATT TCCAGTCTAA AGATCTGCCT
ATCATTGGAA AAGTAAATTA TGGCGCTATT CCGGTTAAAG CTGGTGCAAG GTATTATTTT
GGTGATAACT TCTTTGGTGC TGCTGAATTA GGTGCTGCAT TTGGTACCAA AAGCGGTAGC
TCAACAGCTT TTGTTTATAC ACCAGGTATT GGTGTTGACT TCCCTGTAGC TGACAAAGGT
TCTATTGAAC TGGGCGCACG TTACGAAGGC TGGTCAGCTA ACTCAACAAC CAGTGGCTTC
ATTGGTTTAA GATTAGCTTA CAACATTGGT CTGTAA
 
Protein sequence
MKKLLLLTAV AGLFAFSSVN AQTKAPKLSV GAEFAFPMGD FGDSYNFGYG GSLQYQHPVA 
ANLLVTGSAG FTNFQSKDLP IIGKVNYGAI PVKAGARYYF GDNFFGAAEL GAAFGTKSGS
STAFVYTPGI GVDFPVADKG SIELGARYEG WSANSTTSGF IGLRLAYNIG L