Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3234 |
Symbol | |
ID | 8254353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3840248 |
End bp | 3840937 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936887 |
Product | hypothetical protein |
Protein accession | YP_003093491 |
Protein GI | 255533119 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.12009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAA AATTTTTATT ATCATCGAAG GCCTGGGTAG CCTTTGTGAT TGCTGGTGCC GGTTTAATGA TTTCAATAGC TTCCTGTAAA AAAAGTGACC CTACACCAGA ACCGGTTGGG GAAGCGAGGG TGAGGTATGT AAACGCTGTA GAAGGATCCG CATCGCAGGA TTTGTATGTA AATAATGCTA AAAAAACAAC AACTGCCGTA AGTTACGGGA ACAACTCCGA TTACCTTGTT TTTACTTCTG GTACAAATAC GTTTGCATCT GCTGATGCCG GTGCTACCAC GGCGAACGCC AGTGCACAGG GAGGCGTACA GATCGGAACT TACCTGACCG CCCTTTATTA TAAAACAGCT GATGGAACGA TTGCTTTAGG TGTGTTTGCA GATGATTTAA CTACTGTTTC AGGAAAAGCT AAAGTAAGGT TTGTCAACAT CAATGGCTTT TTAGCAAATA ATATTGCAGT AGCTGTTACA GGCGGGGCAA ATCTGATCCC ATCTGTAGGC TATGCGAGTC TTTCGAATTA TATACAGGTT GATCCAGGTA CTAAATTTAC CCTATCAGCT GCTGGTGTAG TAACCGCGCC TGTTGTTGAT GGTGCGCTTC AGGCCGGTAA AAATTATACC ATCTGGGTTG ACGGAAGTTC TGCTACTGAA CTGAGAGGAC ATGTTATCCT GCAAAACTAA
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Protein sequence | MKRKFLLSSK AWVAFVIAGA GLMISIASCK KSDPTPEPVG EARVRYVNAV EGSASQDLYV NNAKKTTTAV SYGNNSDYLV FTSGTNTFAS ADAGATTANA SAQGGVQIGT YLTALYYKTA DGTIALGVFA DDLTTVSGKA KVRFVNINGF LANNIAVAVT GGANLIPSVG YASLSNYIQV DPGTKFTLSA AGVVTAPVVD GALQAGKNYT IWVDGSSATE LRGHVILQN
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