Gene Phep_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3234 
Symbol 
ID8254353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3840248 
End bp3840937 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID644936887 
Producthypothetical protein 
Protein accessionYP_003093491 
Protein GI255533119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.12009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAA AATTTTTATT ATCATCGAAG GCCTGGGTAG CCTTTGTGAT TGCTGGTGCC 
GGTTTAATGA TTTCAATAGC TTCCTGTAAA AAAAGTGACC CTACACCAGA ACCGGTTGGG
GAAGCGAGGG TGAGGTATGT AAACGCTGTA GAAGGATCCG CATCGCAGGA TTTGTATGTA
AATAATGCTA AAAAAACAAC AACTGCCGTA AGTTACGGGA ACAACTCCGA TTACCTTGTT
TTTACTTCTG GTACAAATAC GTTTGCATCT GCTGATGCCG GTGCTACCAC GGCGAACGCC
AGTGCACAGG GAGGCGTACA GATCGGAACT TACCTGACCG CCCTTTATTA TAAAACAGCT
GATGGAACGA TTGCTTTAGG TGTGTTTGCA GATGATTTAA CTACTGTTTC AGGAAAAGCT
AAAGTAAGGT TTGTCAACAT CAATGGCTTT TTAGCAAATA ATATTGCAGT AGCTGTTACA
GGCGGGGCAA ATCTGATCCC ATCTGTAGGC TATGCGAGTC TTTCGAATTA TATACAGGTT
GATCCAGGTA CTAAATTTAC CCTATCAGCT GCTGGTGTAG TAACCGCGCC TGTTGTTGAT
GGTGCGCTTC AGGCCGGTAA AAATTATACC ATCTGGGTTG ACGGAAGTTC TGCTACTGAA
CTGAGAGGAC ATGTTATCCT GCAAAACTAA
 
Protein sequence
MKRKFLLSSK AWVAFVIAGA GLMISIASCK KSDPTPEPVG EARVRYVNAV EGSASQDLYV 
NNAKKTTTAV SYGNNSDYLV FTSGTNTFAS ADAGATTANA SAQGGVQIGT YLTALYYKTA
DGTIALGVFA DDLTTVSGKA KVRFVNINGF LANNIAVAVT GGANLIPSVG YASLSNYIQV
DPGTKFTLSA AGVVTAPVVD GALQAGKNYT IWVDGSSATE LRGHVILQN