Gene Phep_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3232 
Symbol 
ID8254351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3838592 
End bp3839449 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content45% 
IMG OID644936885 
Producthypothetical protein 
Protein accessionYP_003093489 
Protein GI255533117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.133919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGA CATTTCTTAT TGCGGGCCTG CTGGTGCTTT TTATACTATG TAGTTCCTGG 
GGCTTTTATG CGCATATCCG CATCAACAGG CTGGCGGTTT TTACACTTCC GGCAGGCTTA
AACCGTTTTT ATAAGGCCAA CATCAGCTAC CTGAGCGACC ATGCCGTTGA CCCTGATAAA
AGGCGATATG CAGATACTGC AGAGGCCGCA AGGCATTACC TCGATGTAGA ATTGTATGAA
GCACATATAG ACAGTATTCC AAGAAAATGG GAGGAAGCTG TTAAAAGATA TGGGCTGGTC
CGGCTAAACC AGAATGGCAT TTTACCCTGG CAAATCCAGA AAAGTTACTA TAAACTGGTA
CATGCCCTTA GAGACCGCGA CTCGCTTAAA ATACTTATTT ATTCTGCCTA TTTAGGGCAT
TACCTGGCCG ATGCACATGT ACCTTTACAC ACCACGCAAA ACCACAATGG CCAACTCAGT
AATCAGTTGG GCATACATGC CTTCTGGGAA AGCCGTTTAC CTGAACTGTT TGCAAAAAAA
TATAATTATG TGGTTGGACA GGCAATATAC ATCGAAAACC CTTTAAAAGA GGCCTGGAAA
ATCATTACCC ATACGCATAA AATGGTAGAT ACCGTACTTA CCTTCGAAGC CAGGCTCAAT
GCCCGTTTTC CGGCACACCG GAAATACAGC TTTTCGGAAA GGAACAACCA GGTTGGCAGA
CAGTACTCCC TGGCCTATTC AAAAGCATTT CATGATGGGA TGAACCACAT GGTAGAACGA
CAAATGCGCG CAGCTATACA TAGTATAGGT TCCTACTGGT ATTCGGCATG GGTTGATGCC
GGACAGCCAT TACTGTAA
 
Protein sequence
MKRTFLIAGL LVLFILCSSW GFYAHIRINR LAVFTLPAGL NRFYKANISY LSDHAVDPDK 
RRYADTAEAA RHYLDVELYE AHIDSIPRKW EEAVKRYGLV RLNQNGILPW QIQKSYYKLV
HALRDRDSLK ILIYSAYLGH YLADAHVPLH TTQNHNGQLS NQLGIHAFWE SRLPELFAKK
YNYVVGQAIY IENPLKEAWK IITHTHKMVD TVLTFEARLN ARFPAHRKYS FSERNNQVGR
QYSLAYSKAF HDGMNHMVER QMRAAIHSIG SYWYSAWVDA GQPLL