| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3213 |
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| Symbol | |
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| ID | 8254332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3821349 |
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| End bp | 3821903 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936866 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| Protein accession | YP_003093470 |
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| Protein GI | 255533098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.532165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.221976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAGAC AACCAGAAGT AGCACCCATG TTTCTGGAAC AGCTAAAGCA GATCACAACC
TTCATCTTTG ATGTTGATGG CGTATTGACT AACGGTGATA TCATCGCGTC TGATTCGGGC
GAGTTTTTAC GGACCTTTAA CATCAAGGAT GGTTATGCGC TTCAGCTGGC CGTTAAACGG
GGGTACCGGG TTTGTATTAT ATCAGGTGGC AAAGGCATAA CCATGCAAAA GCGCTTTGAA
GGGCTTGGCA TAACTGACAT TTTTTTAGGT GTTTCCGATA AAGTGGCTGC GTACAAAAAA
TTGCTGGCCA AATACAATCT AACGGCTCCC GAAATTCTAT ATATGGGGGA TGATATCCCT
GATCTTAAAA TTATGCAGCT TGTAGGTTTG CCCACCTGCC CCTCAGATGC TGTTCCGGAA
ATCAAGGCCA TCTCCCAATA CATTTCTCCT TATACCGGTG GTAAAACTGC TGTAAGGGAT
ATTGTAGAAA AAGTACTCAG GGTACAATAC AAGTGGTTTG ATGAAAATCC TTCTGCCGCT
GATTCCGGTA AATAA
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| Protein sequence | MERQPEVAPM FLEQLKQITT FIFDVDGVLT NGDIIASDSG EFLRTFNIKD GYALQLAVKR
GYRVCIISGG KGITMQKRFE GLGITDIFLG VSDKVAAYKK LLAKYNLTAP EILYMGDDIP
DLKIMQLVGL PTCPSDAVPE IKAISQYISP YTGGKTAVRD IVEKVLRVQY KWFDENPSAA
DSGK
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