| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3209 |
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| Symbol | |
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| ID | 8254328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3818108 |
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| End bp | 3819265 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936862 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_003093466 |
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| Protein GI | 255533094 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.492328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.368243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA GAGATTATTA TGATGTGCTT GGTGTATCCA GAAACACATC TGCAGACGAG
ATTAAAAAGG CTTATCGTAA ACTGGCCATT AAGTATCACC CGGATAAAAA CCCGAATGAT
AAAGCAGCTG AAGAAAAATT CAAAGAAGCA GCTGAGGCTT ACGAAGTCCT GAGTAATCCT
GAGAAAAAAC AGCGTTACGA CCATTATGGT CATGCAGGTG TTGGTGGTGC TTCAGGCGGC
GGATATGGCG GTGGCGGAAT GAATATGGAA GATATATTCA GTCAGTTCGG AGATATTTTT
GGAGGTGGCG GCAGCCCTTT CGAAAGCTTT TTCGGTGGCC AGCAGTCCCG TGGTGGCCGT
CGTGTGGCCA AAGGCAGTAA TCTGCGCATC AAGGTAAAAC TTACACTCGA AGAAATTGCC
AATGGCACCG AGAAAAAGAT AAAGGTAAAC AAACAGATCG TTTGTAAAAC CTGCGACGGT
ACAGGGGCTA AAGACCGCTC ATCGGTAAGT ACCTGTAAAA CCTGTGGTGG AAGTGGTGCG
GTACGCCGCG TAACCAATAC CATATTGGGA CAAATGCAAA CCACCTCTAC CTGCCCTACC
TGTAATGGAA GCGGATCGCA GATCACTGCT AAATGCGGAT CATGCCATGG TGAAGGTGTG
GTAAGAGGTG AAGAAACCAT TACCATCAAC ATTCCTGCAG GTGTAAGCGA TGGCATGCAG
CTGAGCATGA GCGGAAAAGG AAATGCAGCC CCTAACGGTG GTATCCCGGG CGATCTGATC
ATACTGATTG AAGAGATCCC TCATGAAACA CTGAAACGTG AAGGGAACAA TGTAGTATAT
GACCTGCATG TATCTATTGT AGATGCAGCT TTGGGCTACA GCGCTGAAGT ACCGACCATC
GATGGCAAGG CGAAGATTAA AATTGAGCCC GGTACCCAGA GCGGAAAACT GTTACGTTTA
AAAGGAAAAG GTATTCCTGA GATCAATTCC TATCACCGTG GCGATGAGAT CATCCACGTA
AACATCTGGA CACCCAAAGC CTTAAGCGCA GAAGAAAGGG CCATTTTAGA AAGGCTGAGG
GAATCGCCAA ATTTTAAACC CCAGCCAGGA AAAAATGACA AAAGCTTCTT CGAGAAGATG
AAAGAATATT TTGAATAA
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| Protein sequence | MSKRDYYDVL GVSRNTSADE IKKAYRKLAI KYHPDKNPND KAAEEKFKEA AEAYEVLSNP
EKKQRYDHYG HAGVGGASGG GYGGGGMNME DIFSQFGDIF GGGGSPFESF FGGQQSRGGR
RVAKGSNLRI KVKLTLEEIA NGTEKKIKVN KQIVCKTCDG TGAKDRSSVS TCKTCGGSGA
VRRVTNTILG QMQTTSTCPT CNGSGSQITA KCGSCHGEGV VRGEETITIN IPAGVSDGMQ
LSMSGKGNAA PNGGIPGDLI ILIEEIPHET LKREGNNVVY DLHVSIVDAA LGYSAEVPTI
DGKAKIKIEP GTQSGKLLRL KGKGIPEINS YHRGDEIIHV NIWTPKALSA EERAILERLR
ESPNFKPQPG KNDKSFFEKM KEYFE
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