Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3205 |
Symbol | |
ID | 8254324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3814537 |
End bp | 3816420 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936858 |
Product | hypothetical protein |
Protein accession | YP_003093462 |
Protein GI | 255533090 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.298581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTAACAT GGATCGTCAA TAGCAGCATC GCACAGACCT GTGTGGGTTC TTTAGGTGAT CCTGTTGTAA ATAACGACTT TGGCCGGGGA GCTGCAAACT ATGGCCCTGC TTTAATCAAC AGTACCACTT ATAATTTTGT AGGTACCGGT ACCCCTAGTG ATGGAAGTTA CACCATTACA AAAACAACGG CAGGCATGCA TGTAGGAAAC TGGCACCAGA TCCGCAACCA TACACCTAAT GATCCCGATG GTTATATGAT GATTGTGAAT GCAAATGATG TTCCGGGTGT ATTTTATGAG GCTGAAGTAC CGGTAGACCT TTGTCCGAAC ACGACATACG AATTTGCGGC ATGGGTAATT AATCTGCTTA CCTACAGTGG CAAAAAACCG AACCTTACAT TTTCCATACT TAGCCTCAAC AACCAGCCGC TGGCCACACC TTATAATACC GGCGACATCA CAGAGGGCAG CGCTACAGAC TGGAAACAAT ATGGATTTTT ATTTAGTACT ACAGGAAATG TGAACCGGGT AAAAATCAGG ATTACCAATA ACGGACCTGG CGGAAACGGG AACGATATTG CTTTAGATGA CATCACCTTC AGGGCTTGCG GACCCAAATT AACCCCATCG GTCAATCTCG CAAGTTTAAC CACGCAGCAT CTATGTGAAG GTGAAAGCAA AGATTACAGT TTTAAGGTTG AAGTAGAGGG CTCAACTACA CTTCAGTACC AATGGCAGTT AAATACAGGG AACGGATGGA ATGACATCCC CAATGAAACG GGTACAGCCC TCAGTGTTAA GTTTGTCCAG GCCCTAAAGG GAACCTATCA ATATCGCCTC GCCGCAGCCG AACCGGTCAA CTTCAATACG GCCTCCTGCC GAACTTTGTC ATTGCCCATC ACAGTTCAGG TAAACCCACT ACCTGTCCCT GTTTTACCCA ACGTGGCCAC TTTTTGTGTT GGCGATCAGA TTGCATTGAA TTTAACTGCT GTTCCAGGGG CTACTTATTT ATGGACAGGG CCAAACAGTT ATCATTCTAC TGAGCCATCG CCGGTTATCA ATGATGCCGC TCTACAAATG CAGGGCCTTT ATAAGGTAAC CATAACCTCT CCTGCCAATT GTACTGCAGA GGGTCAGACC TTAATACAAA TCGTACCCCG CCCTGTTGCT GTTGTTTTGC CTGTTGCCCC TATATGCCAG GGTAATGCCG TACAACTGAA TGCTTCCGGC GGAACCAGCT ACAGCTGGTC GCCATCTACC GGCCTGTCCG ATGCAAATGC AGCCAATCCG ATGGCCACCC CTAAGCTCAC TACAACTTAT ACCGTTACAG TTTCCAATGG GGCTTGTGAA GCCAGCGCAG CTGTTACCCT TATTGTAAAT GAAAATGCAA CTGCTTATGC CGGTGCCGAC AAAAAAATCC TTGAGGGACA GCAGACTACT TTAGATGGAG TTGTGGGCGA TAATTCAAAT TTTTTCTGGT CGCCCGCCGA AGGCCTGGAT GATCCTTATA AGCTCATCCC GATAGCCGCT CCAACCAGGG ATATTACCTA CACGCTCAAT GCCATTTCCA AATTCGGCTG CAGCAGTGCT GCTGACCAGG TATTGGTAAA AGTATATAAA ACGGTAATTG TACCCAATTC CTTTAGCCCC AACGGAGATG GTATCAACGA CCTCTGGAAC ATTACTGCAA TTGAAACCTA TGCCAATTCA AATGTAAAAA TAATGAACCG GTACGGTCGT CTCCTTTTCG AGAGTTCCGG CTATGAAAAA CCCTGGAACG GGAAATACAA AAATGAAGAC CTGCCATCAG GCGTTTATTA TTATGTTATT CATTTAAATC CGGAACTTAA ACCCCTTACC GGTTCATTAA TGCTGATCAG ATAA
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Protein sequence | MLTWIVNSSI AQTCVGSLGD PVVNNDFGRG AANYGPALIN STTYNFVGTG TPSDGSYTIT KTTAGMHVGN WHQIRNHTPN DPDGYMMIVN ANDVPGVFYE AEVPVDLCPN TTYEFAAWVI NLLTYSGKKP NLTFSILSLN NQPLATPYNT GDITEGSATD WKQYGFLFST TGNVNRVKIR ITNNGPGGNG NDIALDDITF RACGPKLTPS VNLASLTTQH LCEGESKDYS FKVEVEGSTT LQYQWQLNTG NGWNDIPNET GTALSVKFVQ ALKGTYQYRL AAAEPVNFNT ASCRTLSLPI TVQVNPLPVP VLPNVATFCV GDQIALNLTA VPGATYLWTG PNSYHSTEPS PVINDAALQM QGLYKVTITS PANCTAEGQT LIQIVPRPVA VVLPVAPICQ GNAVQLNASG GTSYSWSPST GLSDANAANP MATPKLTTTY TVTVSNGACE ASAAVTLIVN ENATAYAGAD KKILEGQQTT LDGVVGDNSN FFWSPAEGLD DPYKLIPIAA PTRDITYTLN AISKFGCSSA ADQVLVKVYK TVIVPNSFSP NGDGINDLWN ITAIETYANS NVKIMNRYGR LLFESSGYEK PWNGKYKNED LPSGVYYYVI HLNPELKPLT GSLMLIR
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