Gene Phep_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3205 
Symbol 
ID8254324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3814537 
End bp3816420 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content46% 
IMG OID644936858 
Producthypothetical protein 
Protein accessionYP_003093462 
Protein GI255533090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.298581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAACAT GGATCGTCAA TAGCAGCATC GCACAGACCT GTGTGGGTTC TTTAGGTGAT 
CCTGTTGTAA ATAACGACTT TGGCCGGGGA GCTGCAAACT ATGGCCCTGC TTTAATCAAC
AGTACCACTT ATAATTTTGT AGGTACCGGT ACCCCTAGTG ATGGAAGTTA CACCATTACA
AAAACAACGG CAGGCATGCA TGTAGGAAAC TGGCACCAGA TCCGCAACCA TACACCTAAT
GATCCCGATG GTTATATGAT GATTGTGAAT GCAAATGATG TTCCGGGTGT ATTTTATGAG
GCTGAAGTAC CGGTAGACCT TTGTCCGAAC ACGACATACG AATTTGCGGC ATGGGTAATT
AATCTGCTTA CCTACAGTGG CAAAAAACCG AACCTTACAT TTTCCATACT TAGCCTCAAC
AACCAGCCGC TGGCCACACC TTATAATACC GGCGACATCA CAGAGGGCAG CGCTACAGAC
TGGAAACAAT ATGGATTTTT ATTTAGTACT ACAGGAAATG TGAACCGGGT AAAAATCAGG
ATTACCAATA ACGGACCTGG CGGAAACGGG AACGATATTG CTTTAGATGA CATCACCTTC
AGGGCTTGCG GACCCAAATT AACCCCATCG GTCAATCTCG CAAGTTTAAC CACGCAGCAT
CTATGTGAAG GTGAAAGCAA AGATTACAGT TTTAAGGTTG AAGTAGAGGG CTCAACTACA
CTTCAGTACC AATGGCAGTT AAATACAGGG AACGGATGGA ATGACATCCC CAATGAAACG
GGTACAGCCC TCAGTGTTAA GTTTGTCCAG GCCCTAAAGG GAACCTATCA ATATCGCCTC
GCCGCAGCCG AACCGGTCAA CTTCAATACG GCCTCCTGCC GAACTTTGTC ATTGCCCATC
ACAGTTCAGG TAAACCCACT ACCTGTCCCT GTTTTACCCA ACGTGGCCAC TTTTTGTGTT
GGCGATCAGA TTGCATTGAA TTTAACTGCT GTTCCAGGGG CTACTTATTT ATGGACAGGG
CCAAACAGTT ATCATTCTAC TGAGCCATCG CCGGTTATCA ATGATGCCGC TCTACAAATG
CAGGGCCTTT ATAAGGTAAC CATAACCTCT CCTGCCAATT GTACTGCAGA GGGTCAGACC
TTAATACAAA TCGTACCCCG CCCTGTTGCT GTTGTTTTGC CTGTTGCCCC TATATGCCAG
GGTAATGCCG TACAACTGAA TGCTTCCGGC GGAACCAGCT ACAGCTGGTC GCCATCTACC
GGCCTGTCCG ATGCAAATGC AGCCAATCCG ATGGCCACCC CTAAGCTCAC TACAACTTAT
ACCGTTACAG TTTCCAATGG GGCTTGTGAA GCCAGCGCAG CTGTTACCCT TATTGTAAAT
GAAAATGCAA CTGCTTATGC CGGTGCCGAC AAAAAAATCC TTGAGGGACA GCAGACTACT
TTAGATGGAG TTGTGGGCGA TAATTCAAAT TTTTTCTGGT CGCCCGCCGA AGGCCTGGAT
GATCCTTATA AGCTCATCCC GATAGCCGCT CCAACCAGGG ATATTACCTA CACGCTCAAT
GCCATTTCCA AATTCGGCTG CAGCAGTGCT GCTGACCAGG TATTGGTAAA AGTATATAAA
ACGGTAATTG TACCCAATTC CTTTAGCCCC AACGGAGATG GTATCAACGA CCTCTGGAAC
ATTACTGCAA TTGAAACCTA TGCCAATTCA AATGTAAAAA TAATGAACCG GTACGGTCGT
CTCCTTTTCG AGAGTTCCGG CTATGAAAAA CCCTGGAACG GGAAATACAA AAATGAAGAC
CTGCCATCAG GCGTTTATTA TTATGTTATT CATTTAAATC CGGAACTTAA ACCCCTTACC
GGTTCATTAA TGCTGATCAG ATAA
 
Protein sequence
MLTWIVNSSI AQTCVGSLGD PVVNNDFGRG AANYGPALIN STTYNFVGTG TPSDGSYTIT 
KTTAGMHVGN WHQIRNHTPN DPDGYMMIVN ANDVPGVFYE AEVPVDLCPN TTYEFAAWVI
NLLTYSGKKP NLTFSILSLN NQPLATPYNT GDITEGSATD WKQYGFLFST TGNVNRVKIR
ITNNGPGGNG NDIALDDITF RACGPKLTPS VNLASLTTQH LCEGESKDYS FKVEVEGSTT
LQYQWQLNTG NGWNDIPNET GTALSVKFVQ ALKGTYQYRL AAAEPVNFNT ASCRTLSLPI
TVQVNPLPVP VLPNVATFCV GDQIALNLTA VPGATYLWTG PNSYHSTEPS PVINDAALQM
QGLYKVTITS PANCTAEGQT LIQIVPRPVA VVLPVAPICQ GNAVQLNASG GTSYSWSPST
GLSDANAANP MATPKLTTTY TVTVSNGACE ASAAVTLIVN ENATAYAGAD KKILEGQQTT
LDGVVGDNSN FFWSPAEGLD DPYKLIPIAA PTRDITYTLN AISKFGCSSA ADQVLVKVYK
TVIVPNSFSP NGDGINDLWN ITAIETYANS NVKIMNRYGR LLFESSGYEK PWNGKYKNED
LPSGVYYYVI HLNPELKPLT GSLMLIR