Gene Phep_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3202 
Symbol 
ID8254321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3812488 
End bp3812943 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content41% 
IMG OID644936855 
ProductUspA domain protein 
Protein accessionYP_003093459 
Protein GI255533087 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.805747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0850987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA AAAAGATTTT AATTGCTGTT GATAACAGTA CATGCTCAGA AAAAGCCGCC 
AAAACAGGTT ATGAAGTAGC AAAAACCTTT GGAGCAGAGG TTGCACTGGT CAACATTATA
GAACCTATAC CAGCTAATAT TAATCCCGAT CTGACACTTG CACCGGTTTT TTTAGAGGCT
TACGACAACA GTGAAGAGAA TAGCCACGTT TTGCTAAAAG AAATAGAAAC GAAATTTGGA
CAGGGTATCC CAACCACTTA TCTGAGTGTA ATCGACAGTG CTGCACATGG CATCATTAAA
CAGTCGGACG AATGGGGATC TGACCTTATT GTGATCGGTA CCTATGGCCG TACTGGTATT
TACCATTTCC TGATGGGTAG TGTGGCAGAA CACGTAGCCA GGAAGTCAGC CTGCCCGGTA
TTAATTATAC CAAATAAATA TGAAGAAAAA GCCTGA
 
Protein sequence
MNLKKILIAV DNSTCSEKAA KTGYEVAKTF GAEVALVNII EPIPANINPD LTLAPVFLEA 
YDNSEENSHV LLKEIETKFG QGIPTTYLSV IDSAAHGIIK QSDEWGSDLI VIGTYGRTGI
YHFLMGSVAE HVARKSACPV LIIPNKYEEK A