| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3199 |
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| Symbol | |
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| ID | 8254318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3804652 |
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| End bp | 3805551 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936852 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003093456 |
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| Protein GI | 255533084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.304748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.316415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCC ACCTCCACAC CCTTAGCGGG CATCAAAACC CTATCTATGC CTTGGCCAAT
GCGGCTGAGG AAAATGCATT TTATAGTGCA GGGAATGACA AAGGTGTGGT AGAATGGTCG
CTGACCAGCA TGGGTTTTGT AAAAGTACTG GCACCGGTAC AAAGCTCGGT ATATGCCCTG
CACCGGCACA GCAACTTCCT GTTTATTGCA CAAAGAAGTG GAGTGATCCT GGTATTTGAT
CTGCTGCTGG AAAAGACCAT TGCAATGCTA AATCACCATC AAAAGGGTGT TTTTGATATC
AAGACCATTG GCCATAAAAA TGAGTTGCTC AGCACCGGAG AAGATGGAAC AGTTGCCGTA
TGGTCGTTAA AAGACCTTTC TTTACTGTAT CACTTCCAGG TGATACAAAA CACTGTGCGG
GTAATTGCCA TCAGTAATGA TGAAAAAGAA GTGGCCCTGG GCTGCAAGGA TGGTATGATC
AGGATTTACA ATTCGGAAGA TTACGGACTC ATTACAGAAC TGGAAGCACA TACTTTACCT
ATAACTTCAC TTCAGTACGA TCCAACCTCG ACTTACCTTA TCTCGGGCAG CAGAGATGCA
CAGTTAAAGG TTTGGCACCT GCCCGACTAC AGTCCCGGAC CTGCGATCCC TGCCCACATG
TTCGGGATTT ACAGCATTGC TTTCCACCCT TCTGCACCCT TTTTCGCCAC CTGTAGTCAG
GATAAAAGCA TCAAGCTTTG GGACAGCAAA AACTTTAAGC TTTACAAGAT ATTAAGCCTT
GAAAAGAATA CACCCGGGCA TTTCCACTCC ATTAACAAGC TGATCTGGAG CAATGATGGC
CGCTACCTGA TCTCTACCGG CGATGACCGG CAGGTGATGG TTTGGGAATT TAATCCTTAA
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| Protein sequence | MITHLHTLSG HQNPIYALAN AAEENAFYSA GNDKGVVEWS LTSMGFVKVL APVQSSVYAL
HRHSNFLFIA QRSGVILVFD LLLEKTIAML NHHQKGVFDI KTIGHKNELL STGEDGTVAV
WSLKDLSLLY HFQVIQNTVR VIAISNDEKE VALGCKDGMI RIYNSEDYGL ITELEAHTLP
ITSLQYDPTS TYLISGSRDA QLKVWHLPDY SPGPAIPAHM FGIYSIAFHP SAPFFATCSQ
DKSIKLWDSK NFKLYKILSL EKNTPGHFHS INKLIWSNDG RYLISTGDDR QVMVWEFNP
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