Gene Phep_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3181 
Symbol 
ID8254300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3786679 
End bp3787635 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content44% 
IMG OID644936834 
Productglycosyl transferase family 2 
Protein accessionYP_003093438 
Protein GI255533066 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTT CTGTTACCAT CCCCCTATAC AATGAAGAGG AGTCTTTGCC CGAGTTAACC 
GCGTGGATAG CCAAGGTAAT GCAGGAAAAT AACTTTTCTT ATGAAATTCT TTTTGTGGAT
GATGGAAGTA CAGATTCATC ATGGGCCGTT ATTGAAGCAC TGAAAAAGGA ATACGATGCG
GTAAGAGCCA TTAAATTTAG AAGGAACTAC GGTAAGTCTG CCGGCCTTAA TGTGGCTTTT
GAAGCTGCCC GGGGTGATGT AGTGATCACT ATGGATGCGG ACCTGCAGGA CAGTCCGGAT
GAGATTCCGG AATTGTATCG CAGGATAAAG GAAGAAAAAT TTGACCTGGT ATCCGGCTGG
AAGAAAAAAC GGTACGATCC GCTGAGTAAA ACCATTCCTA CTAAAATATA CAATGCGGCA
ACCCGGAGAA TGTCGGGCAT TCACAACCTG CACGATTTTA ACTGCGGATT AAAAGCCTAC
CGGAAGGAAG TTGTAAAAAA TATAGAAGTA TATGGTGAGA TGCACCGCTA CATACCTGTT
ATTGCAAAAT GGGCCGGTTT TACCAAAATC GGAGAGCAGG TTGTAGAGCA CAGATCACGC
AAATATGGGG TAACCAAATT TGGCATGAGC CGGTTTATCA ATGGGCTGTT GGACCTTTTG
TCGATATTTT TTGTAGGTAA ATTTGGAAAA CGCCCAATGC ATTTTTTTGG CACAATGGGG
GTGCTGAGCT TTTTGATCGG CACATTTCTC GCCATCTGGT TGATTGGCGT GAAATTATAC
CACATTTCAA ATGGGATCCC GCTAAAACGG GATGTCACAG ACCAGCCCTT GTTTTATATC
GCACTGGTTG CAATAATATT GGGTTCCCAA TTGTTTTTAA CAGGTTTTGT GGCAGAACTG
GTTTCCAGAA GTGCCCCTGA GCGAAACCAT TACCTGGTTG AAAAGGAGAT CGGCTAA
 
Protein sequence
MDISVTIPLY NEEESLPELT AWIAKVMQEN NFSYEILFVD DGSTDSSWAV IEALKKEYDA 
VRAIKFRRNY GKSAGLNVAF EAARGDVVIT MDADLQDSPD EIPELYRRIK EEKFDLVSGW
KKKRYDPLSK TIPTKIYNAA TRRMSGIHNL HDFNCGLKAY RKEVVKNIEV YGEMHRYIPV
IAKWAGFTKI GEQVVEHRSR KYGVTKFGMS RFINGLLDLL SIFFVGKFGK RPMHFFGTMG
VLSFLIGTFL AIWLIGVKLY HISNGIPLKR DVTDQPLFYI ALVAIILGSQ LFLTGFVAEL
VSRSAPERNH YLVEKEIG