| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3177 |
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| Symbol | |
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| ID | 8254296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3782238 |
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| End bp | 3783389 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936830 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003093434 |
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| Protein GI | 255533062 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.535597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAATA TATCCATTTT AGGTGCTACG GGTTCTGTAG GTACACAGGC TTTAGAAGTA
ATCGGGAGTA ATCCTGACCT GTACAAAGTT TTGGCACTTA CTGCCCAGTC CAACACTGAT
TTATTGATTG AGCAGGCCTT AAAGTTTAAT CCGGTACTGG TGGTAATTAC TGATGAAAGC
AAATATGCAA AAGTAAAAGC TGCACTTTCT GGTACAGGTA TTAAAGTGCT GGCTGGTGAG
GAAGCACTTT GCGAAGCTGC AGCATTAGAT GAGGTACACC TGGTGCTTAC CGCTCTCGTA
GGATCAGTAG GTTTAAGACC TACAATTGAA GCCATCAATG CAGGAAAGGA TATCGCATTA
GCCAACAAAG AGACTTTGGT AGTGGCGGGC GACCTGATTA CACGTCTGGC AAAAGAAAAA
GGAGTGAAGA TTGTGCCCGT AGATTCGGAG CATTCCGCTA TCTTCCAATG CCTGGTTGGC
GAAAATAACC ATACGGTCGA AAAAATATAT CTTACCGCTT CCGGGGGGCC ATTCAGAGGG
AAAGATCATT CTTTTTTAAT GGGGGTTACC AAGGCCGAAG CACTAAAACA TCCCAACTGG
GTAATGGGTG CAAAGATTAC AATTGATTCA GCTTCGCTGA TGAACAAGGG ACTGGAAGTG
ATAGAAGCCA AATGGCTGTT TGGACTGGAA GCAGATCAGA TTGATGTGAT TGTACACCCC
CAATCTATTG TGCATTCACT GGTACAGTTT AACGATGGAT CGATGAAGGC ACAGATGGGT
TTACCTGATA TGAAACTGCC AATCCATTAT GCGCTTGCTT ATCCCGACAG AATAAGCAGC
AATTTTAAGC GTTTTAACTT TATTGATTAT CCTGAACTGA ACTTTTACCA GGCAGACTCA
AAGACATTCA GAAACCTGGA CCTGGCTTAT ACTGCGCTGC GGAAGGGAGG GAATATGCCC
TGCATTATTA ATGCGGCCAA TGAAGTGGTA GTGGGTGCAT TTTTACAGGA CAGGATAGGG
TTTTTACAAA TGAGTGATGT AATTGAGGCC TGTATGGATA ATATTGGTTT TATTGAGAGC
CCCAGCCTGA ATAATTATTT AGAAACAGAT CAGTATACCC GTATATTAGC AGACCAATTA
GTAACAAAAT AG
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| Protein sequence | MKNISILGAT GSVGTQALEV IGSNPDLYKV LALTAQSNTD LLIEQALKFN PVLVVITDES
KYAKVKAALS GTGIKVLAGE EALCEAAALD EVHLVLTALV GSVGLRPTIE AINAGKDIAL
ANKETLVVAG DLITRLAKEK GVKIVPVDSE HSAIFQCLVG ENNHTVEKIY LTASGGPFRG
KDHSFLMGVT KAEALKHPNW VMGAKITIDS ASLMNKGLEV IEAKWLFGLE ADQIDVIVHP
QSIVHSLVQF NDGSMKAQMG LPDMKLPIHY ALAYPDRISS NFKRFNFIDY PELNFYQADS
KTFRNLDLAY TALRKGGNMP CIINAANEVV VGAFLQDRIG FLQMSDVIEA CMDNIGFIES
PSLNNYLETD QYTRILADQL VTK
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