Gene Phep_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3170 
Symbol 
ID8254289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3772686 
End bp3772985 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content36% 
IMG OID644936823 
Producthypothetical protein 
Protein accessionYP_003093427 
Protein GI255533055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.8741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT TATCTATTTT TAGAAAAGTT GCCGTAGCCG AAGGAATTTC TTATGTATTG 
CTGGTATTTA TTGCCATGCC TTTAAAATAT TGGGCAGAAA TGCCTCTGGC AGTTAAATAT
ACAGGCTGGG CGCATGGTGT GCTGTTTATG ATGTATGTGG TACTGTTAAT TATGGCCTGG
ATGGAATACA AATGGAGTTT TAAGAAATCG GCGTTAATTG GTGTAGCTTC GCTACTTCCT
TTTGCTCCTT TCTGGGTAGA TAAAAAGCTT AAAGAAGATA ATTCAAATAA ATCTTGGTAA
 
Protein sequence
MNTLSIFRKV AVAEGISYVL LVFIAMPLKY WAEMPLAVKY TGWAHGVLFM MYVVLLIMAW 
MEYKWSFKKS ALIGVASLLP FAPFWVDKKL KEDNSNKSW