Gene Phep_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3160 
Symbol 
ID8254278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3763250 
End bp3764302 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content45% 
IMG OID644936812 
Producthistidine kinase internal region 
Protein accessionYP_003093417 
Protein GI255533045 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC ATCAGCCAGT ACAACGTTCT GAACGTACCA CTACACGAGA GATTGCGCTG 
TTCGTCTTCG TTTTGCTGGT CATGAGCATT TTGTATGGAA CACCCCGGTT GTTTTCACAA
GGGTTTAGCG CTGCTTTTCT TTTGGAAACA GGTGTAGATT GCCTGATGAT GACTATTGCA
TGTCTTCCGA TTTGGTGGCT GCACTTTCGT AAGCTGGTCC ATCTGCCAAT GAAAACGAGG
TTTGCCCTGC ATATTCTTAC AGCTTTTCTT TATTATGGCA TTTGGGCTGG CCTGTATTAC
TTATATAATC CTATGGTCGG ATTACCAACA ATGAACCGAA ACCAGTTTTT CCAGAATATC
GGTCCTAATT TGCTTTTTTA TATTCAGGTT TTCAGCTCCT TACATATTGA TCTGTTTTTT
CGTGAACGTG AGGCGCAGCA ACTTCGTGAA CAGGAACTCA GGGAGCTGGC ATTCAAAGGA
GAAATCAATG CGTTAAAAGC ACAGATCCAG CCCCATTTTC TATTTAATAC CCTCAATAGC
ATCAGCGCAT CTCTGCCTGG CGAGCAGGAA CATAGCCGGG TGCTCATTGC CCGGCTGGCA
GATACCTTTC GTTACGCGCT CCAGTCCACA CAGCAGGACC TGGTTCCCTT GTCACAGGAA
TTGGACTTTA TGCATACCTA TCTTTCTTTA GAGCAAGGTA GATTTGGAAA AAGGCTGGCT
TTTTCGATCG AAGGCACCGA AGGAACAGCT GAGATTTTAA TTCCTCCAAT GCTACTTCAG
CCTTTTGTTG AAAATGCGAT TAAACATGGC ATTGAGCCAT CAATAGAAGG GGGAAGCGTG
ATCATCAGCT GCATTCGGGA AAGTAAGAAA GTCGGGATCT ATATTGAAAA CACCGGAAGC
CCGTATGTGG GAAACCCGGA GGATCTGTTT CTTGGTAAGG GTGTGGGTGT AAAGAATACC
GCCAAAAGGC TGGAAAATCA ATTTGCGGAG AAACTACAGG TTTCCATAAA CGATAAAGGC
GGACTGAGGA TTCACTTTTG CATTCCAGGT TAG
 
Protein sequence
MKHHQPVQRS ERTTTREIAL FVFVLLVMSI LYGTPRLFSQ GFSAAFLLET GVDCLMMTIA 
CLPIWWLHFR KLVHLPMKTR FALHILTAFL YYGIWAGLYY LYNPMVGLPT MNRNQFFQNI
GPNLLFYIQV FSSLHIDLFF REREAQQLRE QELRELAFKG EINALKAQIQ PHFLFNTLNS
ISASLPGEQE HSRVLIARLA DTFRYALQST QQDLVPLSQE LDFMHTYLSL EQGRFGKRLA
FSIEGTEGTA EILIPPMLLQ PFVENAIKHG IEPSIEGGSV IISCIRESKK VGIYIENTGS
PYVGNPEDLF LGKGVGVKNT AKRLENQFAE KLQVSINDKG GLRIHFCIPG