Gene Phep_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3150 
Symbol 
ID8254268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3755523 
End bp3756692 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content44% 
IMG OID644936802 
ProductFecR protein 
Protein accessionYP_003093407 
Protein GI255533035 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0892633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.911277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA AAGAGGTAAA TGAGTTATTA GACAGATATT TTTCGGGTAA ATGTACACCC 
GAAGAAAAAT CATTGGTTGA GCGTGCCTAT AGCCATTTAA ATAAACCTTA CAATAAGGAT
ATTACTGAGG AACAGTTTCA AAAAATGAAA GACGAGGTTT GGAACAACCT TAATCTAAAT
GCTGAGCCGG TTAGAAAAAC CTTATGGCCA GGTATTGCAA TTGCTGCCGC TGCGGTAGCA
GCGATTGTGT TTGGGCTGTT CTTTTTTAAA GCGCCAGGTA AACCTGAACC TGGTTCAGGA
GCTGCAAACT ATACAAACGA CATTGCCCCG GGTAAAAACA CTGCTACCCT TACCCTTGCC
AATGGTAAAA CCATAATCCT GAGCGATGTT AAAACCGGGG TAATTGTTGA TGCGGATAAA
CTAAGCTACA ATGACGGCAC TGCTGTAGAA CACGGGGATC CAGGCGAAGG CCGGGATGAG
GTGGTAATGA GCACCCCACG TGGCGGCATG TACCAGCTTA CCTTGCCCGA TGGCAGCCAT
GTCTGGCTAA ATGCTGATAC AAAAATTTCT TTCCCTTCAC AATTTATTGG TAAGGAACGC
AAAATATTGC TACTATACGG TGAGGCATAT TTTGAGGCGG CTAAAAATAA AGAAAAGCCA
TTTGTTGTAG AAAGCGATGG GCAGCTGGTA ACCGTACTGG GCACGCATTT TAACATTAGT
GCCTATAAGG ATGAAGGGGC AATTAAAACT ACCTTGCTGG AGGGCGCTGT GCGCGTCTCG
TTATCCCGGG GGAAGCGGAG CGAAAAGAAC GGGGCCCTCT CCTATCGTAG ACAGGGCGGA
CAGGACGGCG AAGCCGTTGT TCTTAAACCC AACCAACAAT CCCTTGTTAC GGAAAACCAA
AGCATAAGCA TTAAACCAGT AGATGTAGAA CAGGTTGTGG CCTGGAAAAA CAGCCAGTTT
ATGTTTGAAA GCGAAAATAT CCAAACCATT ATGAAGATGG TTGAACGCTG GTATAATGTA
GATGTGGAAT ATATAGGGGA AATTACCGAT GAAAAGTTTG GAGGTGGGGT ATCCAGATTT
GACAATGTTT CAAAGGTGTT AAAATCGTTG GAATCTACAG GTAAGGTCCA TTTTAAAATT
GAGGGCAGGA AAATTTATGT AAGCAAATAA
 
Protein sequence
MDNKEVNELL DRYFSGKCTP EEKSLVERAY SHLNKPYNKD ITEEQFQKMK DEVWNNLNLN 
AEPVRKTLWP GIAIAAAAVA AIVFGLFFFK APGKPEPGSG AANYTNDIAP GKNTATLTLA
NGKTIILSDV KTGVIVDADK LSYNDGTAVE HGDPGEGRDE VVMSTPRGGM YQLTLPDGSH
VWLNADTKIS FPSQFIGKER KILLLYGEAY FEAAKNKEKP FVVESDGQLV TVLGTHFNIS
AYKDEGAIKT TLLEGAVRVS LSRGKRSEKN GALSYRRQGG QDGEAVVLKP NQQSLVTENQ
SISIKPVDVE QVVAWKNSQF MFESENIQTI MKMVERWYNV DVEYIGEITD EKFGGGVSRF
DNVSKVLKSL ESTGKVHFKI EGRKIYVSK