Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3150 |
Symbol | |
ID | 8254268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3755523 |
End bp | 3756692 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936802 |
Product | FecR protein |
Protein accession | YP_003093407 |
Protein GI | 255533035 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0892633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.911277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATA AAGAGGTAAA TGAGTTATTA GACAGATATT TTTCGGGTAA ATGTACACCC GAAGAAAAAT CATTGGTTGA GCGTGCCTAT AGCCATTTAA ATAAACCTTA CAATAAGGAT ATTACTGAGG AACAGTTTCA AAAAATGAAA GACGAGGTTT GGAACAACCT TAATCTAAAT GCTGAGCCGG TTAGAAAAAC CTTATGGCCA GGTATTGCAA TTGCTGCCGC TGCGGTAGCA GCGATTGTGT TTGGGCTGTT CTTTTTTAAA GCGCCAGGTA AACCTGAACC TGGTTCAGGA GCTGCAAACT ATACAAACGA CATTGCCCCG GGTAAAAACA CTGCTACCCT TACCCTTGCC AATGGTAAAA CCATAATCCT GAGCGATGTT AAAACCGGGG TAATTGTTGA TGCGGATAAA CTAAGCTACA ATGACGGCAC TGCTGTAGAA CACGGGGATC CAGGCGAAGG CCGGGATGAG GTGGTAATGA GCACCCCACG TGGCGGCATG TACCAGCTTA CCTTGCCCGA TGGCAGCCAT GTCTGGCTAA ATGCTGATAC AAAAATTTCT TTCCCTTCAC AATTTATTGG TAAGGAACGC AAAATATTGC TACTATACGG TGAGGCATAT TTTGAGGCGG CTAAAAATAA AGAAAAGCCA TTTGTTGTAG AAAGCGATGG GCAGCTGGTA ACCGTACTGG GCACGCATTT TAACATTAGT GCCTATAAGG ATGAAGGGGC AATTAAAACT ACCTTGCTGG AGGGCGCTGT GCGCGTCTCG TTATCCCGGG GGAAGCGGAG CGAAAAGAAC GGGGCCCTCT CCTATCGTAG ACAGGGCGGA CAGGACGGCG AAGCCGTTGT TCTTAAACCC AACCAACAAT CCCTTGTTAC GGAAAACCAA AGCATAAGCA TTAAACCAGT AGATGTAGAA CAGGTTGTGG CCTGGAAAAA CAGCCAGTTT ATGTTTGAAA GCGAAAATAT CCAAACCATT ATGAAGATGG TTGAACGCTG GTATAATGTA GATGTGGAAT ATATAGGGGA AATTACCGAT GAAAAGTTTG GAGGTGGGGT ATCCAGATTT GACAATGTTT CAAAGGTGTT AAAATCGTTG GAATCTACAG GTAAGGTCCA TTTTAAAATT GAGGGCAGGA AAATTTATGT AAGCAAATAA
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Protein sequence | MDNKEVNELL DRYFSGKCTP EEKSLVERAY SHLNKPYNKD ITEEQFQKMK DEVWNNLNLN AEPVRKTLWP GIAIAAAAVA AIVFGLFFFK APGKPEPGSG AANYTNDIAP GKNTATLTLA NGKTIILSDV KTGVIVDADK LSYNDGTAVE HGDPGEGRDE VVMSTPRGGM YQLTLPDGSH VWLNADTKIS FPSQFIGKER KILLLYGEAY FEAAKNKEKP FVVESDGQLV TVLGTHFNIS AYKDEGAIKT TLLEGAVRVS LSRGKRSEKN GALSYRRQGG QDGEAVVLKP NQQSLVTENQ SISIKPVDVE QVVAWKNSQF MFESENIQTI MKMVERWYNV DVEYIGEITD EKFGGGVSRF DNVSKVLKSL ESTGKVHFKI EGRKIYVSK
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