| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3138 |
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| Symbol | |
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| ID | 8254256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3745512 |
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| End bp | 3747818 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936791 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_003093396 |
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| Protein GI | 255533024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.358373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACAC AAAATCTCGG CTACCCGCGA ATTGGTAACC AAAGACAACT AAAAAAAGCC
TGTGAACAGT ATTGGGCCGG TAAAATTGGT CAGGATGAAC TAAACGGGAT TGCCCGTAAA
ATCAAGCAGG ATAACTGGCA GACCCAACTC GATGCAGGGA TTGACCTGAT CCCTTGTAAT
GATTTTAGCT TTTACGACCA GGTATTGGAT ACCAGCCTGC TGTTGGGCGT TATTCCTCAG
CGATATTCGC CGGTACTTTC AAAGGTAAAG ACCAATAATG AAATTGACCT TTATTTTGCT
ATGGCCCGTG GCTATCAGAA AGATGGTCTG GACATTACCG CAATGGAAAT GACCAAATGG
CTGGATACCA ACTACCATTA TATCGTGCCG GAATTTACCG CTAATCAGGA GTTCAGGATT
TTTAATGAGA ACATTTTTAG CGAATACAAT ACGGCAAAGC TGCAGCTCGG TGAAAAGGCC
AAGCCAGTAC TTTTAGGTCC TGTAAGCTAC CTTTTACAAG GCAAAGAAAA GGAACAGGGA
TTTGAACGCA TAGATCTGAT TAAAAAATTG GTGCCTGTAT ATGTGGACAT CATCAATCGT
CTTAGACAAC AGGGCGCTAA ATGGATCCAG CTGGACGAGC CCTGCCTGGT ACTCGACCTT
TCGAAAAAAG AGAAAGAAGC ATTTGATTAT GCTTACCGTG CTATATCCAA TCGTGTAAGT
GGTGTTAAAA TATTGCTTGC TACCTATTTT GAAGCCTTGC TGGACAACAC CGGGCTGGCC
CTAAGCCTTC CTGTTACTGC ACTTCATATA GATTTGGTAC GTGCACCTGA GCAACTGGAT
GAAGTGCTTG CACTGATTCC GGACAGCCTG CAACTTTCTT TGGGTGTAGT AGACGGACGC
AATGTTTGGA AGAACGACTA TGAAAAGTCT TTAAGCCTGA TCAATAAGGC TATTGAAAAA
CTTGGAGCAG ACAGGCTGAT CATCGCACCT TCCTGCTCAT TATTGCATAG CCCGATCGAT
CTGGATCTGG AAACGGCAAT TGATCCTGAG ATCAAAAACT GGATGGCATT TGCCAAACAA
AAATTGACTG AAGTAAACGA AATCCGCCAG ATTGCCGAAG GCAATACGAC TTTACTGGAA
GCCAACAAAG CCGCCATCGA AAGCAGGCGT AGCTCAAAAA AGGTGCACAA ACAAGATGTT
AAAAACCGTA TTGCGACAAT AAATGATGCT GATGCGACCC GTCAAAGTGC ATTTTCTGTA
CGCCAGCGCT TACACCAGGA GCGTTTTAAT TTTCCTGCAT TCCCAACAAC TACCATCGGT
TCATTCCCCC AAACTGATGA TATCCGTCAA TTGCGTGCGA AATTCAAAAA AGGTGACTTG
AGCCAGGAAC AATATGATCA GGCGATAGCG CAGGCAACTG TTGAGGCCAT CCGTTGGCAG
GAAGAAATTG GCCTGGACGT ACTGGTACAT GGCGAGTTTG AGCGCAATGA CATGGTAGAA
TATTTCGGCG AGCAGCTGGA TGGTTTCCTG TTTACCAAAA ACGGATGGGT GCAGAGTTAT
GGCAGCCGTT GTGTAAAACC ACCTGTTATT TATGGTGATG TGAGCCGTCC GGCAGACATG
ACGGTACGCT GGAGCAAATT TGCTGCTGCC CAGACTGACA AACCAATGAA AGGTATGCTG
ACCGGTCCGG TAACAATTTT GCAATGGTCA TTTGTGCGCG ACGATCAGCC TAGAGATATA
ACTACCAACC AGATCGCTTT TGCCATCCGC GATGAGGTTG TAGCTTTGGA AGAAGCTGGT
ATCGGGATTA TCCAGATCGA TGAGGCAGCT ATCCGTGAGG GACTGCCATT GAGAAAGGCA
AAGCACCCGC ATTACCTGGA CTGGGCAGTG AAAGCTTTCC GCATTACTGC CAGTGGCGTA
CAGGATAAAA CACAGATCCA TACGCACATG TGCTATAGCG AGTTCAATAA CATCATTGAG
CATATCGCGG CTATGGATGC CGATGTGATC ACCATTGAAA CTTCGCGTTC TCAGATGGAA
CTGTTGCAAG CCTTTGCCCA TTTTGAATAT CCGAATGAAA TAGGTCCTGG GGTATACGAT
ATCCACTCAC CACGTGTGCC AGGTATAGAA GAAATGGCGT CACTTTTGGC AAAAGCAGCG
GATTTGCTGC CTGTGCGTAA CCTTTGGGTA AACCCGGATT GCGGACTTAA AACACGTAAA
TGGCCGGAAA CCAAAGCTGC ACTGGAAAAC ATGGTGGCAG CTGCCAAACA GGCAAGAGCG
CAAATCGGCG TAGAAGGAAT TGTCTGA
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| Protein sequence | MLTQNLGYPR IGNQRQLKKA CEQYWAGKIG QDELNGIARK IKQDNWQTQL DAGIDLIPCN
DFSFYDQVLD TSLLLGVIPQ RYSPVLSKVK TNNEIDLYFA MARGYQKDGL DITAMEMTKW
LDTNYHYIVP EFTANQEFRI FNENIFSEYN TAKLQLGEKA KPVLLGPVSY LLQGKEKEQG
FERIDLIKKL VPVYVDIINR LRQQGAKWIQ LDEPCLVLDL SKKEKEAFDY AYRAISNRVS
GVKILLATYF EALLDNTGLA LSLPVTALHI DLVRAPEQLD EVLALIPDSL QLSLGVVDGR
NVWKNDYEKS LSLINKAIEK LGADRLIIAP SCSLLHSPID LDLETAIDPE IKNWMAFAKQ
KLTEVNEIRQ IAEGNTTLLE ANKAAIESRR SSKKVHKQDV KNRIATINDA DATRQSAFSV
RQRLHQERFN FPAFPTTTIG SFPQTDDIRQ LRAKFKKGDL SQEQYDQAIA QATVEAIRWQ
EEIGLDVLVH GEFERNDMVE YFGEQLDGFL FTKNGWVQSY GSRCVKPPVI YGDVSRPADM
TVRWSKFAAA QTDKPMKGML TGPVTILQWS FVRDDQPRDI TTNQIAFAIR DEVVALEEAG
IGIIQIDEAA IREGLPLRKA KHPHYLDWAV KAFRITASGV QDKTQIHTHM CYSEFNNIIE
HIAAMDADVI TIETSRSQME LLQAFAHFEY PNEIGPGVYD IHSPRVPGIE EMASLLAKAA
DLLPVRNLWV NPDCGLKTRK WPETKAALEN MVAAAKQARA QIGVEGIV
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