Gene Phep_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3125 
Symbol 
ID8254243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3732311 
End bp3733405 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content42% 
IMG OID644936778 
Producthistidine kinase internal region 
Protein accessionYP_003093383 
Protein GI255533011 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAG TAACAAACCG TTCCTATATA GCCGTCTTAC TCCATCTGTT TTCATGGCTT 
TTATTTGCTT TTGTGCTCCT TTTTCATCAG CCTTTATCCT GGAACATCCA TGTCCCCTTT
GAGTTCTGGG TCAAACAAAG CTGCGTATTG CTCATGCTGA TCATCGTATT TTATATGAAC
AGCCAGTTGT TTGTGCCCCG GTTGCTCCTG AAAAACAAGA TCCTTATTTA TGTCCTTGTT
ATTCTTGTTA TCGCAGTGCT GGCCGGGCCG CTGATAAAAA TGGTCGACAA TGCCTTGAAT
TTACCCGGGC TGATGGATCG GGCTTTTAGT GAAATTGGTA TTCAAAGGCC TCCGAAACGC
TCGGGCAGGA TTGATGTTTT CCTGCTGATG ATGACCTTGT TTATGGTCGG GATCAGTACC
AGTGTAACCC TGATCAGGAA ATGGCAGGCC GATCAACAGG GCCGGGAAGC ATTGGAAAAG
GAAAAGATAG CCTCCGAACT TTCCTTTTTA AAGGCGCAGA TCAATCCCCA TTTCTTTTTC
AATACGCTGA ACAATATTTA TGCCCTGACC CATGTTGATA TTGAAAAGTC GCGTAAGGCA
CTGCATAAAC TTTCAAGAAT GATGCGTTAC CTGCTTTATG AGACCCAAAC GGGGAGTACC
CCAATCAGTA AGGAAATTTC TTTTATTGTA GATTATATAG AACTGATGAA ACTGCGCTTA
AATGGGCTGA CTACTGTGGT TTTTGAAGAG CCCGTATTAA AGTATGATCC CCCGATTGCC
CCAATGCTGT TTTTGCCCTA TATAGAAAAT GCGTTTAAAT ATGGGGTTAG TACTACAGAA
CCATCGGTGA TAGCTATTGT TATTGAATTA AAGGGGAATG AGCTGAGCAT GACCATAAAG
AACCGCGTAT TTAACAATTA TGCAGAAACT GCTGATGGCT ATGGCGGAAT AGGGCTGAGC
AACACCAAAA GAAGACTTGA ATTGTTATAC CCGGGCAGAC ATAATTTTTC GGCTTATGAA
ACCGCTGGAC CAGCTGAATT TATTGTTCAC TTAAACCTTG TTCTTGATGA TACTGAATTG
CATAGCAGTA GATGA
 
Protein sequence
MFAVTNRSYI AVLLHLFSWL LFAFVLLFHQ PLSWNIHVPF EFWVKQSCVL LMLIIVFYMN 
SQLFVPRLLL KNKILIYVLV ILVIAVLAGP LIKMVDNALN LPGLMDRAFS EIGIQRPPKR
SGRIDVFLLM MTLFMVGIST SVTLIRKWQA DQQGREALEK EKIASELSFL KAQINPHFFF
NTLNNIYALT HVDIEKSRKA LHKLSRMMRY LLYETQTGST PISKEISFIV DYIELMKLRL
NGLTTVVFEE PVLKYDPPIA PMLFLPYIEN AFKYGVSTTE PSVIAIVIEL KGNELSMTIK
NRVFNNYAET ADGYGGIGLS NTKRRLELLY PGRHNFSAYE TAGPAEFIVH LNLVLDDTEL
HSSR