Gene Phep_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3123 
Symbol 
ID8254241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3731002 
End bp3731490 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content43% 
IMG OID644936776 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003093381 
Protein GI255533009 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.603064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT CTAAAAAAGA ACTTTTCATT ACGCATCTTT TTGATGCGCC CAGGGAAGTT 
GTATTCAGGG CCTGGACCGA TCCTGAACAG CTAAAGCACT GGTATGCCCC GGACGGCTGT
ACCATAGAGT TTAAAACCAT TGATGTACGG GAAACAGGTA GTTTCCATTC CTGCATCCAC
GATCCGGTTC ATGGCCCCTG CTGGATTAAA GGTATTTACA AGGAGGTCAT ATTTCCTGAA
AAACTGGTTT TTTCGATGAT CCTCAGCAAT GAAAAAGCTG AAGATGTACG CGCTATAGCA
GCAGGAAAAC CGGAAGAATG GCCTGAAGAA ATATTAACTA CCGTAACTTT TACCAGTATT
GGCCAGCAGA CCAAGCTTGC CATACACCAG ACTGTAGATG AAGCGGAAGC TAAAAAGACC
GGTGCTTACC AAAGCTGGAT CAAAATGTTC AATAAACTGG CCGCACTTAT TGATGTAAAA
ACTGATTAA
 
Protein sequence
MEQSKKELFI THLFDAPREV VFRAWTDPEQ LKHWYAPDGC TIEFKTIDVR ETGSFHSCIH 
DPVHGPCWIK GIYKEVIFPE KLVFSMILSN EKAEDVRAIA AGKPEEWPEE ILTTVTFTSI
GQQTKLAIHQ TVDEAEAKKT GAYQSWIKMF NKLAALIDVK TD