Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3117 |
Symbol | |
ID | 8254235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3726284 |
End bp | 3727045 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936770 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003093375 |
Protein GI | 255533003 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000341298 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGGAT GGGATGATTT TTTTACAAAG ATCGTTGCAC ACGGTTATCA GGGTGTGGAA ACTGATCTGC CAGCAGAGGG GGAAAGGGAT GTATTTATGG ATGGCCTGGA TAAATATGGA TTAAAGTTTA TTGCCCAGCA TTGGGAAACG ACAACAGCAG ACATGGAACT GCATAGGCAG CAGTATGAAG AAAGGCTGCG TAAGCTGGCC GCTTTAAAAC CGCTGTTCAT CAATTCGCAT ACAGGTAAAG ATTTTTTTAG CCATGAACAA AACTGCAGTC TGCTCGGTAT TGCAGAAAAG GTTACCCGGG AAACCGGCGT ACAGGTGCTT CACGAAACGC ACCGCAGTCG TTTTGCCTAT GCTGCACATG TTACCATGCC TTACCTGCAG GAAAACCCTG CATTGCGGCT TACCTTAGAT GTATCCCATT GGTGCGCCGT TGCTGAAAGT TTGCTTCAGG ATCAGCCCGA GGCAATTGAT ATGGCCATAG CGCATACCGC ACATATTCAT GCAAGGGTAG GCTTTGCTCA AGGCCCGCAG GTAGCTGATC CCTCATTGCC GGAATATAAA GAAGCACTTG ATTTTCATTT GAACTGCTGG GATAAGGTGA TCCGTAACTG TAAAGATGAA TTCCTTTGCA TCACCCCGGA GTTTGGTCCT TTACCATATA TGCCCATTGG CCAGCCGCCT GATCAGCAAT GGAAAAACAA CCTGTATATA ATGAACTTAT TAAAAACCAG ATATCAGCTA AACCAATCAT GA
|
Protein sequence | MRGWDDFFTK IVAHGYQGVE TDLPAEGERD VFMDGLDKYG LKFIAQHWET TTADMELHRQ QYEERLRKLA ALKPLFINSH TGKDFFSHEQ NCSLLGIAEK VTRETGVQVL HETHRSRFAY AAHVTMPYLQ ENPALRLTLD VSHWCAVAES LLQDQPEAID MAIAHTAHIH ARVGFAQGPQ VADPSLPEYK EALDFHLNCW DKVIRNCKDE FLCITPEFGP LPYMPIGQPP DQQWKNNLYI MNLLKTRYQL NQS
|
| |