Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3114 |
Symbol | |
ID | 8254232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3722846 |
End bp | 3724138 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936768 |
Product | glucose/galactose transporter |
Protein accession | YP_003093373 |
Protein GI | 255533001 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000902202 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCAA CAGTAAATAT AGCCAAGCCG GCAACAGGTG GTACCTATAT CAAACAGGTA ATGACCATTG GTTTTTTCTT TTTCATTTTT GGTTTTGTAA CCTGGGTAAA CGGAACATTG ATCCCTTACC TGCGCATTGC CTGTGAACTG GAAGAGTGGC AGGCCTACCT GGTTACTTTT GCCTTTTATA TTTCTTATAC GTTTATGGCC CTGCCGTCCA GTAAAATATT GCAGGCTACG GGCATCATCA AAGGGATGCA GGTAGGACTG CTCATTATGG CTGCGGGTTG TCTCTTGTTT GTGCCGGCAG CCATGATGCG TTATTATCCG CTTTTCCTGT TGGGCCTGTT TGTTGTCGGA GCTGGAACAA CTTTGCTGCA AACTGCTGTA AATCCATACA TTACCAAACT GGGCGATCCT GCGAGGGCAG CACAGCGCAT CAGCATTATG GGTATCTGCA ATAAATTTGC AGGTATACTG GCCCCGATGA TCCTGGGCGC TATTATCCTG AAAAATTCGG ATGGCCTGCT GGCGGAACTG GAAAGTCTGG CCCCGGCAGC AAAAACTATG CGTTTGGACG AACTGGCCCA GGATGTGATC ATGCCTTATA TCGTTTTAAC CATCGTACTT TGTGTAATAG CCTTTGGCAT TAAATATGCC CATCTGCCCG AAATCGCCCC TTCGGAAGAC GATCTGGCCA TAAATCAGCA AGAAGAACTG GCCAATGGGG GCAAAAGCTA TAACGGCATT TTTATGCTGG GCTTCACAGC TATATTTGTA ACGGTAGGGG TAGAGGTTAT TGCCGGCGAT ACCATCAGCA ATTATGGTAT TTATCATGGC GTACGTTTAG ACGTGGCCAA AAGCCTGACT TCCTATACCC TCGCATCTAT GCTTACGGGC TATGTTTTAG GGGCCCTATT TATTCCAAGA CTGATTAGTC AGGAAAAGGC CTTTCTATAT TCTTCCCTGC TGGGCGTATT GTTGACACTG CTCGCAGTAT TTGTACCTGG CCAGGCCTCA ATCGCTTTCA TTGCCCTGCT GGGTTTTGCC AATGCCATGT TATGGCCTGC CATCTGGCCA CTTGCCTTAA GGGGGCTTAG CGGTGCCTTA CTGAACCGGG GCTCGGCCAT TCTCATTATG GGTATTGCCG GAGGGGCTAT TTTGCCGCTG GTTTACAGCT GGCTATCACA TATTTCCAAT AACCAGCTGG CCTACCTGCT GCTCATCCCC TGCTATCTTT TTAATGTGTA TTACCAAATT TCCAGGACTA AAAAACAAGT ATATCATGCT TAA
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Protein sequence | MEATVNIAKP ATGGTYIKQV MTIGFFFFIF GFVTWVNGTL IPYLRIACEL EEWQAYLVTF AFYISYTFMA LPSSKILQAT GIIKGMQVGL LIMAAGCLLF VPAAMMRYYP LFLLGLFVVG AGTTLLQTAV NPYITKLGDP ARAAQRISIM GICNKFAGIL APMILGAIIL KNSDGLLAEL ESLAPAAKTM RLDELAQDVI MPYIVLTIVL CVIAFGIKYA HLPEIAPSED DLAINQQEEL ANGGKSYNGI FMLGFTAIFV TVGVEVIAGD TISNYGIYHG VRLDVAKSLT SYTLASMLTG YVLGALFIPR LISQEKAFLY SSLLGVLLTL LAVFVPGQAS IAFIALLGFA NAMLWPAIWP LALRGLSGAL LNRGSAILIM GIAGGAILPL VYSWLSHISN NQLAYLLLIP CYLFNVYYQI SRTKKQVYHA
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