| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3097 |
|---|
| Symbol | |
|---|
| ID | 8254215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3699863 |
|---|
| End bp | 3700897 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644936751 |
|---|
| Product | FecR protein |
|---|
| Protein accession | YP_003093356 |
|---|
| Protein GI | 255532984 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.77039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.330772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC AATACTTTCT GAAGCTGTTA AGCAAAAGAC TAAGCGGAGA AATATCTCCT
GAAGAAGATG TAAAATTACA GGAGGCAATT GAACAGGAAC CCGATTTTAA GCAGACCGCT
ACAGCATTGA CCCGATATTT TGAAAACAAA AATGTCAGCG CTAGAAACAG TGTGTATACA
GTAGATAAAT TAATAAAGAC CCGGGATAGG ATTGTCCTTG CAGAAAATCA GGGTTTTGTG
CCAAAGTACA ATCATTCGGA AGTGATAAAG AGAGGTTTTT CAGGTTTATC CCTGCTAAAA
ATTGCTGCCA TCTTTCTGGT ATTGCTGGGT AGTACTTTTA TAACTTATCA TTTTTTAAAC
AGGACACAGC CTTTAAAGTT CGATACTTTA AATACTACGG CTGATAAGGT ATTTAAAACA
CTCGACGATG GTACCAAAGT ATATTTAAAC CGGGGCTCAT CCATCAGGTA CAACCAGGGT
TTTGGAAAGG AAAAAAGGGA AATATTTTTG GATGGGGAGG CTTTTTTTGA CGTCGCTAAA
AATAAGGCCA TACCTCTTTT TATACATGTC CGTAACCTCA ATATTGAAGT AAAAGGGACT
GCTTTTAATG TAAATGCTGA TCAGAAAAAA CATAATGTAG AGATTTCCCT GCTTAGGGGA
CTTATAGAAA TTACCAGTAG CCTGGATAAA GACAGCAGGG TTTTGCTGAA GCCAAATGAA
AAACTGATAG CGGCAGCACA GCTTAGCCCT GCTGGTACAG GATTTAAGGT CATCAGCATG
GCTGCAGAGA AACAGCTGCA GGAAATTAAA TGGACACAGG ACTCGCTGAT GTTTAAAAAG
GAAAAATTAA AAGACCTGGT GCTTCGTCTT GAAAAGAAAT ATGATGTTAA AATAGAAATC
AGGAAAGAAG AATTAAAGGA CAAAAGGTTT AGTGGTGCTT TTGCTGCCGA AGGCCTGAAA
GAAGCACTTG AAGCCCTGAA ACTTTCCTAT CCCTTTACCT ACATCATCAG TGATAAACTG
GTCATTCTCA AATAA
|
|---|
| Protein sequence | MMKQYFLKLL SKRLSGEISP EEDVKLQEAI EQEPDFKQTA TALTRYFENK NVSARNSVYT
VDKLIKTRDR IVLAENQGFV PKYNHSEVIK RGFSGLSLLK IAAIFLVLLG STFITYHFLN
RTQPLKFDTL NTTADKVFKT LDDGTKVYLN RGSSIRYNQG FGKEKREIFL DGEAFFDVAK
NKAIPLFIHV RNLNIEVKGT AFNVNADQKK HNVEISLLRG LIEITSSLDK DSRVLLKPNE
KLIAAAQLSP AGTGFKVISM AAEKQLQEIK WTQDSLMFKK EKLKDLVLRL EKKYDVKIEI
RKEELKDKRF SGAFAAEGLK EALEALKLSY PFTYIISDKL VILK
|
|---|
| |