Gene Phep_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3094 
Symbol 
ID8254212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3696022 
End bp3696747 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content38% 
IMG OID644936748 
Producthypothetical protein 
Protein accessionYP_003093353 
Protein GI255532981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0531337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA ACAAATTGAG ACAAGAAACT TTGATCGCAT CTGCTGATAC TGATGATTTA 
AAAAGAGTAT TTCAGGATAG AAAAAGAACC AACATTTTAA ATTCAGCAGA ACAAAAGACG
ATCTCTTTTC TCGTTACCAG AGTTCCCAGC TACATTTCTT CAAATATGCT CACTTTTACA
GGCACCTTTG GCTCTGTATT GGTTTTAATG GGTTTTATCC TGAGTACTTA TCTGACACGG
AATTATCTTT TACTGGGTGT AGCAGGTCTG GCCATCAATT GGTTTGGAGA TTCATTGGAT
GGACGCATAG CTTATTACCG CAATATCCCC CGTAAATGGT ATGGCTTTTC GCTGGATATC
ATTATGGACT GGGTAAGTAC CGTGCTGATC GGTTTAGGCT ATATGGTATA TGCCCGCAAC
GAATATGAAC TGATTGCCTT TATTTTTGTG GTTTTGTATG GCTGGGCAAT GATCATTTCT
CAGCTAAGGT ATAAAATAAC AGATATTTAC AGTATAGATT CCGGACTGGT TGGCCCAACG
GAAATCAGGG TAATTTTAGC TTTAATACTT ATCCTGGAAG TGACATTTGG TCATTTGATA
GAATATTTTG CAGGTGGGAT CTGCATTGTC CTTTTCATCA TCAACATTGT AGATACCAGA
AAACTTTTAA AACTTGGAGA CATCAGGGAT AACCTGGAAC GAAAGGCTAA AAAGAATGCA
GCTTAA
 
Protein sequence
MEQNKLRQET LIASADTDDL KRVFQDRKRT NILNSAEQKT ISFLVTRVPS YISSNMLTFT 
GTFGSVLVLM GFILSTYLTR NYLLLGVAGL AINWFGDSLD GRIAYYRNIP RKWYGFSLDI
IMDWVSTVLI GLGYMVYARN EYELIAFIFV VLYGWAMIIS QLRYKITDIY SIDSGLVGPT
EIRVILALIL ILEVTFGHLI EYFAGGICIV LFIINIVDTR KLLKLGDIRD NLERKAKKNA
A