Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3094 |
Symbol | |
ID | 8254212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3696022 |
End bp | 3696747 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644936748 |
Product | hypothetical protein |
Protein accession | YP_003093353 |
Protein GI | 255532981 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0531337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAAA ACAAATTGAG ACAAGAAACT TTGATCGCAT CTGCTGATAC TGATGATTTA AAAAGAGTAT TTCAGGATAG AAAAAGAACC AACATTTTAA ATTCAGCAGA ACAAAAGACG ATCTCTTTTC TCGTTACCAG AGTTCCCAGC TACATTTCTT CAAATATGCT CACTTTTACA GGCACCTTTG GCTCTGTATT GGTTTTAATG GGTTTTATCC TGAGTACTTA TCTGACACGG AATTATCTTT TACTGGGTGT AGCAGGTCTG GCCATCAATT GGTTTGGAGA TTCATTGGAT GGACGCATAG CTTATTACCG CAATATCCCC CGTAAATGGT ATGGCTTTTC GCTGGATATC ATTATGGACT GGGTAAGTAC CGTGCTGATC GGTTTAGGCT ATATGGTATA TGCCCGCAAC GAATATGAAC TGATTGCCTT TATTTTTGTG GTTTTGTATG GCTGGGCAAT GATCATTTCT CAGCTAAGGT ATAAAATAAC AGATATTTAC AGTATAGATT CCGGACTGGT TGGCCCAACG GAAATCAGGG TAATTTTAGC TTTAATACTT ATCCTGGAAG TGACATTTGG TCATTTGATA GAATATTTTG CAGGTGGGAT CTGCATTGTC CTTTTCATCA TCAACATTGT AGATACCAGA AAACTTTTAA AACTTGGAGA CATCAGGGAT AACCTGGAAC GAAAGGCTAA AAAGAATGCA GCTTAA
|
Protein sequence | MEQNKLRQET LIASADTDDL KRVFQDRKRT NILNSAEQKT ISFLVTRVPS YISSNMLTFT GTFGSVLVLM GFILSTYLTR NYLLLGVAGL AINWFGDSLD GRIAYYRNIP RKWYGFSLDI IMDWVSTVLI GLGYMVYARN EYELIAFIFV VLYGWAMIIS QLRYKITDIY SIDSGLVGPT EIRVILALIL ILEVTFGHLI EYFAGGICIV LFIINIVDTR KLLKLGDIRD NLERKAKKNA A
|
| |