| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3086 |
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| Symbol | |
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| ID | 8254204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3685273 |
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| End bp | 3686679 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936740 |
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| Product | glycogen/starch synthase, ADP-glucose type |
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| Protein accession | YP_003093345 |
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| Protein GI | 255532973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0511779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00761784 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATCA TACACCTTAG TGCAGAATGT TATCCAATTG CTAAAGTTGG TGGTTTGGGC
GACGTAGTAG GCGCCCTGCC AAAGTATCAG AATAAACTTG GACATGTAGC TAAGGTGGTA
ATGCCTGCGT ACCAGACTAA ATTTATGCAG GAGAATGAAT TTGAGGTGGT TTATGATGGC
TGGGGTAAAC TTGGCTTTCG TGATTTTACA GTAAGGATTT TTAGGGAGAA GACAAATAAA
CTGGGTTTTG ATCTGTTCCT GGTACATATA GCTGGTTTAC TGGACAGGCC ACAGGTATAT
GGTTATCATG ACGATACGGA ACGTTTCCTG GCTTACCAGA TTGCAGTGCT GGACTGGATT
GCACAATGGG AACATCGCCC TGATGTAGTG CATTGTCATG ACCATCATAC CGGCCTGGTA
CCTTTTATGA TGGCTTACTG TCTGCAGTTC AGAAGCCTGA GCCAGATTCC TACCGTTCTA
ACCATACACA ATGCACAGTA CCAGGGACAA TTTGGTTGGG ATAAACTACA TTACATTCCT
GCTTTTGATT TGTGGAAATC GGGACAGCTG GACTGGAAAG GAAGTATTAA CCCTTTGGCA
TCAGCGATAA AATGTGCCTG GCGGGTAACT ACTGTTTCAC CAAGCTATCT GGATGAGATC
AGTTTTAAAG CCAATGGGCT GGAAGATCTG CTGGCCCAGG AAAGGGGTAA ATCTGCCGGG
ATCTTAAATG GCATTGACAA TGAAGTCTGG AATCCACAGA CGGATCCGAT GTTGGAAAAG
AAATTTACTT TGCGTACTGT TGATGCAGGT AAAAAGATTA ATAAAGCTGC ACTTTGTGCT
GTTTTTAACC TTGATCCGGA AAAGCCGCTG TTTACTTTTA TCGGCAGGTT AGTAGGAGAA
AAAGGAGCTG ATCTGTTGCC CGATATATTT TACAATGCAC TGCTTACCTA TAACAAAGAA
ATTAATGTAT TGGTACTGGG CTCGGGCGAT CCACAGGTTG AAGGGCGTTT ATCACATTTA
AAGGAAGCTT TTCCGGGAAA TTATAATGTT TATATCGGGT ATAATGAGCA ATTGTCGCAT
CAGATCTATG CTGCGGCAGA CTTTTTGCTG ATGCCTAGCA GGGTAGAACC GTGCGGTTTA
AACCAGATGT ATGCCTTAAG GTACGGCACC ATTCCAATTG TAAGAAGAAT AGGGGGATTG
AAAGATACCG TGATTGATAT TGGCGATGGT GGTTTTGGTA TCTGTCATGA CCAGACCAGT
GTTTGGGATG TAGGGCATGC CATTGGCCGG GCTTATGAGT TGTACTCAGA TGAAAAAAAA
GTAAAAGAAA TACGTAAGTT TATGATGCAG CTGGACCACT CATGGGATAG GGCAGCGCAG
CAATATATTG ATCTATACCA AATTTAA
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| Protein sequence | MEIIHLSAEC YPIAKVGGLG DVVGALPKYQ NKLGHVAKVV MPAYQTKFMQ ENEFEVVYDG
WGKLGFRDFT VRIFREKTNK LGFDLFLVHI AGLLDRPQVY GYHDDTERFL AYQIAVLDWI
AQWEHRPDVV HCHDHHTGLV PFMMAYCLQF RSLSQIPTVL TIHNAQYQGQ FGWDKLHYIP
AFDLWKSGQL DWKGSINPLA SAIKCAWRVT TVSPSYLDEI SFKANGLEDL LAQERGKSAG
ILNGIDNEVW NPQTDPMLEK KFTLRTVDAG KKINKAALCA VFNLDPEKPL FTFIGRLVGE
KGADLLPDIF YNALLTYNKE INVLVLGSGD PQVEGRLSHL KEAFPGNYNV YIGYNEQLSH
QIYAAADFLL MPSRVEPCGL NQMYALRYGT IPIVRRIGGL KDTVIDIGDG GFGICHDQTS
VWDVGHAIGR AYELYSDEKK VKEIRKFMMQ LDHSWDRAAQ QYIDLYQI
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