| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3081 |
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| Symbol | |
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| ID | 8254198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3680157 |
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| End bp | 3680849 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936734 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_003093340 |
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| Protein GI | 255532968 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00259807 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGATAG ATAAAGACGA ATTTAGAAAA TACGCAGTTA AACATCACCG TATAAATGGT
TTAAATGTAG ACCGTTATAT TGGTGCTACC AATAATTCAC CAAAAGCCAT GACACCTTAT
ATTATTGAGG AGCGTCAGCT TAATGTTGCT CAGATGGATG TGTTTTCCCG TTTGATGATG
GACCGTATCA TCTTTTTAGG AGATGCCATT TATGATGGAA ATGCGAATAT CATCCAGGCC
CAATTGCTAT TTTTACAGTC GACAGACAAC AACAGGGACA TCCAGATCTA CATCAACTCA
CCAGGTGGAT CAGTATATGC AGGCCTGGGT ATTTATGATA CCATGCAGTA TATTGCACCT
GATGTGGCTA CCATCTGTAC AGGTATGGCC GCATCAATGG GGGCCGTTTT ACTGGTTGCC
GGTGCTAAAG GTAAACGTGC GGCATTGCCT CATTCAAGAG TGATGATCCA CCAGCCTTCG
GGCGGGGCAC AAGGGGTAGC TTCTGATATG GAGATCAACC TGAGGGAAAT GCTTAAATTG
AAAAAAGAAT TATACGATAT TATTTCAAAC CATTCGGGAC AGAGCTATGA GTGGGTAGAA
AAGGCTTCAG ACCGTGATTA CTGGATGAAG GCTGAGGAAG CAAAAGGCTT CGGAATGATT
GATGAAGTGC TAGGTGCTAG CAACAAAGAC TAA
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| Protein sequence | MKIDKDEFRK YAVKHHRING LNVDRYIGAT NNSPKAMTPY IIEERQLNVA QMDVFSRLMM
DRIIFLGDAI YDGNANIIQA QLLFLQSTDN NRDIQIYINS PGGSVYAGLG IYDTMQYIAP
DVATICTGMA ASMGAVLLVA GAKGKRAALP HSRVMIHQPS GGAQGVASDM EINLREMLKL
KKELYDIISN HSGQSYEWVE KASDRDYWMK AEEAKGFGMI DEVLGASNKD
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